Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc243133g00002 ATGATCCCTAGCAATGGCAATAATAATAATAATGAAGATGGGAATAATAATAATAATGGAAGGCTCACTTGGAATTTCTATAAGAAAACTTGCCCAAAGGTGTTGCCAGTGATAAGGTATGTGGTTGAAAAGGCAATAAAGAAAGAACCTCGCGTTGGAGCATCATTGCTACGTTTGCATTTTCATGACTGCTTTGTTAATGGTTGTGATGGATCAGTTCTACTAGATGATTCTCATAACATAAATGGTGAGAAGAATTCCCCACCAAATAAGAACTCTCTGAGAGGATTTGAAGTGGTTGATGAGATTAAATCAGAATTAGACAAAGCTTGCAACGCTTCTATTGTATCTTGTGCTGATATCTTAGCTGTTGCTGCTCGTGATTCTGTTTCCTTT 396 0.3687 MIPSNGNNNNNEDGNNNNNGRLTWNFYKKTCPKVLPVIRYVVEKAIKKEPRVGASLLRLHFHDCFVNGCDGSVLLDDSHNINGEKNSPPNKNSLRGFEVVDEIKSELDKACNASIVSCADILAVAARDSVSF 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc243133g00002 132 Pfam Peroxidase 39 131 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc243133g00002 132 Gene3D - 22 132 - -
Stsc243133g00002 132 PANTHER PEROXIDASE 72-RELATED 22 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc243133g00002 132 PRINTS Haem peroxidase superfamily signature 53 67 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc243133g00002 132 PRINTS Haem peroxidase superfamily signature 116 132 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc243133g00002 132 ProSiteProfiles Plant heme peroxidase family profile. 21 132 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc243133g00002 132 PRINTS Plant peroxidase signature 95 108 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc243133g00002 132 PRINTS Plant peroxidase signature 31 50 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc243133g00002 132 PRINTS Plant peroxidase signature 115 125 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc243133g00002 132 PRINTS Plant peroxidase signature 55 75 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc243133g00002 132 ProSitePatterns Peroxidases active site signature. 53 64 IPR019794 GO:0004601
Stsc243133g00002 132 SUPERFAMILY Heme-dependent peroxidases 22 131 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc243133g00002 Stsc-Chr243133 13279 13815 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc243133g00002 20 130 Peroxidase AT5G05340 59.459 6.29e-46 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc243133g00002 K00430 - gmx:100816056 174.481