Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc243106g00001 ATGAATTTTATTTGGCTGGGATCTTGCTATGTGGAATTGAGATCTTTAGGACATATGAAGATACATCACCAGTCATTGATGCTGGTTACTGTGATAAAGAATGTACAGTATCCTTATATGCAGGGAATCTCAATAAGGTACCTTCTCTTTGGAGCCTCAAAGACATTCTTGAAGAAACATTCTAAGAAGAGCTCTGATGGCAGAAAAGATCAAGATGATCAGAAGAAATCAAAAGTGGAAGAAAATCAAGACAAAAGTACTCAAACTGGAGAAGCACCTAAAGAGAATTTCATTGATGTAAGAGCAAGAAGAGGCCAAGCTACTTATAGCCACAGTCTTGCTTAA 345 0.371 MNFIWLGSCYVELRSLGHMKIHHQSLMLVTVIKNVQYPYMQGISIRYLLFGASKTFLKKHSKKSSDGRKDQDDQKKSKVEENQDKSTQTGEAPKENFIDVRARRGQATYSHSLA 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc243106g00001 114 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 60 114 IPR024097 GO:0006355
Stsc243106g00001 114 MobiDBLite consensus disorder prediction 58 114 - -
Stsc243106g00001 114 MobiDBLite consensus disorder prediction 59 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc243106g00001 Stsc-Chr243106 511 1737 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc243106g00001 68 114 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G10120 57.447 1.92e-09 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc243106g00001 - - adu:107461155 82.0333