Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc243098g00001 ATGGTATGCAACAATTGTGTAAGGTTTTTGGTTGTTCAAGCCGTAACCTTTGTCAAACGAGTGGGAATAAACAACAGTAGGAGGTATTTGCAAGAAGTCTTTAGAATCTCCTATTCGCATAATCGTCAATTCAAGACCTGCACAGTGATGATGGTGGCTACGAGTTCTGTGTCAAGAAGGGCTGGTTCCCCTGTGGATATGATGCCTGAGAAAGATGACAAAGACCGATTTACAAGTGCTAGGTGGAAAAGTGAGGATGGAAGACTTAGCTATGGATATTCAAGTGTTAAAGGGAAGAGGGAGACGATGGAGGATTTTTATGATATTAAAACGTTGAAGATTGGTGGTCATTCAGTATGCTTATTTGGAATATTTGATGGTCATGGTGGTTCTCGTGCTGCAGAGTATTTGAAAGAGCATCTCTTTAATAATCTCATGAAGCATCCAAAATTTTTTACTGATGCTAAATTGGCTATAAGTGAAACATATCAAGGGACTGATTCTCATTTTTTGGACTCTGAGAAAGACTCTTTTCGAGATGATGGGTCTACTGCTTCAACGGCTGTTTTGATTGATAGCCATCTTTATGTTGCTAATGTTGGAGATTCTAGGACTATAATATCAAAGGCGGGTAAAGCAATTGCTCTCTCTGAGGATCATAAGCCAAACAGAAGTGATGAACGGAAAAGAATTGAGAATGCTGGGGGTGTTGTCATGTGGGCAGGTACTTGGAGGGTAGGAGGTGTACTAGCAATGTCTCGCGCCTTCGGCAATCGTATGTTGAAGCAGTTTGTTGTTGCAGAACCTGAGATTCAGG 817 0.4113 MVCNNCVRFLVVQAVTFVKRVGINNSRRYLQEVFRISYSHNRQFKTCTVMMVATSSVSRRAGSPVDMMPEKDDKDRFTSARWKSEDGRLSYGYSSVKGKRETMEDFYDIKTLKIGGHSVCLFGIFDGHGGSRAAEYLKEHLFNNLMKHPKFFTDAKLAISETYQGTDSHFLDSEKDSFRDDGSTASTAVLIDSHLYVANVGDSRTIISKAGKAIALSEDHKPNRSDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQ 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc243098g00001 272 SMART PP2C_4 80 271 IPR001932 -
Stsc243098g00001 272 ProSiteProfiles PPM-type phosphatase domain profile. 90 272 IPR001932 -
Stsc243098g00001 272 Gene3D - 79 272 IPR036457 -
Stsc243098g00001 272 SUPERFAMILY PP2C-like 80 271 IPR036457 -
Stsc243098g00001 272 ProSitePatterns PPM-type phosphatase domain signature. 121 129 IPR000222 GO:0043169
Stsc243098g00001 272 CDD PP2Cc 90 272 IPR001932 -
Stsc243098g00001 272 Pfam Protein phosphatase 2C 91 271 IPR001932 -
Stsc243098g00001 272 PANTHER PROTEIN PHOSPHATASE 74 272 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc243098g00001 Stsc-Chr243098 9616 13315 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc243098g00001 1 272 PP2C-type Phosphatase Gene Family AT5G53140 63.415 3.91e-126 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc243098g00001 K17506 - gmx:100805795 431.024