Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc243097g00001 ATGGGTTGTTCGTCGATTCCTATAGATAATCATCATCGATCTTCTTTCACAAACACACATGAGAAGAATACTACACAACCAGATCTTCGTCACTTCAGGCTTGATAATGATTTGATGTCTAAAAATATGAAGAACGATCCTTCGATCATGGAAAAATTCTTTGAGAAAGTAGTGCTGCGACCACCAGGAGGAGTAGGAAGTGGCATAAGGATTGTTTATAGCTGTGGCACTAACAACAACGAACCAGTCAGAAACAACAGCGATGAGATCCATCACCACGACGATCCAAATATTGATTCCGTGAATGTTGCTGATGCTGATGGTGTAAAAGTTTTTGTTGCTTATGGTGATGGTGGAAAAGTTGTTGATGGTGATGGTAACGGTAGTGATGAAGCAGGAATCAGGAGCTTTCCGTACAAGAAACATGGACCGTACATGTGTCCAATGTGTATGGTGGTGTTCTTAACATCACAAAAATTTGCGGCTCACACAAGTTCTCACTACAAGCATGAGACTAAGGATGCGAAAAAGAAAAGAAAAATGATCAAAATAATGCGTAGAAACAAGAAAAGAGCCCACGAAATTCAACAACAGTTCATGGATAAGGCAGCAGGAGAATGA 621 0.4026 MGCSSIPIDNHHRSSFTNTHEKNTTQPDLRHFRLDNDLMSKNMKNDPSIMEKFFEKVVLRPPGGVGSGIRIVYSCGTNNNEPVRNNSDEIHHHDDPNIDSVNVADADGVKVFVAYGDGGKVVDGDGNGSDEAGIRSFPYKKHGPYMCPMCMVVFLTSQKFAAHTSSHYKHETKDAKKKRKMIKIMRRNKKRAHEIQQQFMDKAAGE 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc243097g00001 206 MobiDBLite consensus disorder prediction 1 27 - -
Stsc243097g00001 206 ProSitePatterns Zinc finger C2H2 type domain signature. 147 167 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc243097g00001 Stsc-Chr243097 915 1535 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc243097g00001 6 195 C2H2 Transcription Factor Family AT2G18490 31.754 2.14e-16 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc243097g00001 - - ahf:112709584 150.599