Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc243096g00002 ATGGCGAGTGACAAAGACGAAGAATTAAAGACTAATAAGCACAAGAACAGTAATAATGAAGCTGCATTTTGTGAACCAGGGGTTGTAGCAAAGTTAATGGGATTGGAAACGCACATTGAAGTAAAGCAAGAAGGTTCATCATCAGTTTCATCAATGGAGAAGCCAATGCATAAAAGTTCCTCATCATTATCATCTTCTTCTTCATTTCATGGGGTGCCAACAACTTTCCATTTGCATGAAAATGAAGACTTCTTTGTTCTCAGCTTTGAGTCCAACTCCAGAGGAAGGAAGAATAAGAAGATTCTCAGGTTTGGTGAAGTTGAAGAAAAGATTATGGTTTGTTGTGAAAAAGCGTACATTGATTCAGAAGCGGTGAAGAGGAAGAAAATAAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAGATGTTTGGGAAAGAACAAAGTTGCAAATGAATGCAGTTCTTCAGAAGATTCAAGCCCAGTGTCTGTCTTTGATTTTCAGCGCCAACTTCTTCAAACAGATGTAGATTCAATTGGAGTTGATTTGAATTGGAGAAGGAATTTGTCACCACAGCTTGAAAATGAACAGAAGCATGCTCCACATTCTGATGGTGACATGTTGTTGCTACTTGAAGAGGAAAAGCTTAAGGCAAATGAGAACAACAAACATGACATGTTAAAGAAGACAGAGAATCAGAGGCATAATGATTATGAAGATATATGGAGTCAAATTTGCAAGCTAGTGGAACAAGATTTGTTTGGATTAGATCAGATTAAGGCAGCAAGAATGAGAAAATGTGAAATTGAAAACATATGTGCAGATTTTGAGTCTCAAATTTTTTCTTACTTGTTAAATGAGCTGATAGATCATCTTGTTATTAGTTGCTAG 924 0.3387 MASDKDEELKTNKHKNSNNEAAFCEPGVVAKLMGLETHIEVKQEGSSSVSSMEKPMHKSSSSLSSSSSFHGVPTTFHLHENEDFFVLSFESNSRGRKNKKILRFGEVEEKIMVCCEKAYIDSEAVKRKKINNNNNNNNNNNNNNNNNNNNNNRCLGKNKVANECSSSEDSSPVSVFDFQRQLLQTDVDSIGVDLNWRRNLSPQLENEQKHAPHSDGDMLLLLEEEKLKANENNKHDMLKKTENQRHNDYEDIWSQICKLVEQDLFGLDQIKAARMRKCEIENICADFESQIFSYLLNELIDHLVISC 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc243096g00002 307 MobiDBLite consensus disorder prediction 130 157 - -
Stsc243096g00002 307 MobiDBLite consensus disorder prediction 43 67 - -
Stsc243096g00002 307 Pfam DUF761-associated sequence motif 20 36 IPR032795 -
Stsc243096g00002 307 PANTHER OS05G0128300 PROTEIN 7 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc243096g00002 Stsc-Chr243096 7604 9288 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc243096g00002 163 306 TRM (TON1 Recruiting Motif) Superfamily AT5G58630 31.333 4.33e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc243096g00002 - - aip:107608144 290.812