Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc243076g00003 ATGCCGGTTTGGGCGGCTATTTGGGACTTGCAATTGCCATCATGTATGAGAGGAGTTTGGGTGAAGAATCTCCTTGGGCAGGGTACCTTCAGGTCTTGCCCGAACAAGAGTGTGTGCCATTGGTTTGGACCCTCGATGAAGTCGATGAGCTTTTGCGTGGAACCGAACTTCATCAGGCAGACGGTAAAAGAAGACAAAGTGCTTATCTGTGAAGACTGGAAAGAAAATATCTTTCCCCTATTGGATTCAGCACCTTCAAGGCTTAACCCAACATTTTTTGGTATAGAACAATACTTCGCTGCAAAAAGTCTTATTTCTTCGCGGGGTTTTGAGATAGATGATTACCATGGTTTTGGTATGGTTCCCCTGGCAGATCTATTCAATCATAAAACAGGGGCTGAGGATGTGCATTTCACTGCCTCATCTAATTATGTATCTGATGATGATGCCGATGATAATAATATTAACAATGACGAGAGCATTGCTGATGAAGAAACATTGGCTGAGAAACTTTCTACAGATACGACTGATGTGGATGCACCTCAGGTTGAGAACGGCAATGCTAGTGACACAGAGTGTTTGTCAGATATGGGAGATGGTGATCCTTCATTGCTGGAAATGATTGTGGTAAAAGATGTCAGCAGTGGAGAAGAGGTATTTAATACTTATGGGTTGATGGGTAATGCTGCATTGCTTCATAGATATGGATTTACTGAGCAAGATAATCCTTATGACATTGTTAACATTGATTTGGAAATGGTACTTCAATGGTGCTCCTCTTTGTTTACTGATCGGCATAGTAGGTCAAGGGTCTCCATATGGAGAAGGTTAGGCTACTCTGGATGCGGTGACAAAAACTCAGAATATTTCGAGATCTCATTTGAAGGAGAACCACAGACTGAACTCATAGTTTTGTTGTATGTCATGCTATTGCCAGATAATGCATACCATAAGTTGGACCTCTCGCTATCGGTTGCCGGATCTGGTCATGAATCAAGCGATGCCAATCTTTTGGATGATAACATATTTGCAATCAAATCATGTAATGTGAGCAAGAAATCTCTGCTGACAAAAAAAGTATGTGATGGTTTTTTAGCACTTGTTAACATGAGGGAGTGTCTCTATGGTTCGGAATCGATAGAAGATGATATTGTGCGACTGGGAAATTGTAGTTCGGTTAGAGAGAGGAAGCTGTATCATTCTTTGGTGCTGCAAATATGTGAAAGGAGGATCCTTCAGAGGCTCAGAGATTTTGCTTCTGAGCCATTTGAAACCAATAATCATGGTTCTTCAAGGAAGAAGTTGAAGAAGTCAACAAAGAGAAAAAGATGA 1332 0.4129 MPVWAAIWDLQLPSCMRGVWVKNLLGQGTFRSCPNKSVCHWFGPSMKSMSFCVEPNFIRQTVKEDKVLICEDWKENIFPLLDSAPSRLNPTFFGIEQYFAAKSLISSRGFEIDDYHGFGMVPLADLFNHKTGAEDVHFTASSNYVSDDDADDNNINNDESIADEETLAEKLSTDTTDVDAPQVENGNASDTECLSDMGDGDPSLLEMIVVKDVSSGEEVFNTYGLMGNAALLHRYGFTEQDNPYDIVNIDLEMVLQWCSSLFTDRHSRSRVSIWRRLGYSGCGDKNSEYFEISFEGEPQTELIVLLYVMLLPDNAYHKLDLSLSVAGSGHESSDANLLDDNIFAIKSCNVSKKSLLTKKVCDGFLALVNMRECLYGSESIEDDIVRLGNCSSVRERKLYHSLVLQICERRILQRLRDFASEPFETNNHGSSRKKLKKSTKRKR 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc243076g00003 443 Gene3D set domain protein methyltransferase, domain 1 38 237 - -
Stsc243076g00003 443 ProSiteProfiles SET domain profile. 25 224 IPR001214 GO:0005515
Stsc243076g00003 443 MobiDBLite consensus disorder prediction 423 443 - -
Stsc243076g00003 443 PIRSF RMS1_SET 56 422 IPR011383 GO:0016279|GO:0018026
Stsc243076g00003 443 MobiDBLite consensus disorder prediction 171 196 - -
Stsc243076g00003 443 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 58 411 - -
Stsc243076g00003 443 MobiDBLite consensus disorder prediction 173 192 - -
Stsc243076g00003 443 SUPERFAMILY SET domain 202 242 IPR046341 -
Stsc243076g00003 443 SUPERFAMILY SET domain 46 139 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc243076g00003 Stsc-Chr243076 6333 9679 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc243076g00003 58 435 NAC Transcription Factor Family AT3G56570 51.613 1.90e-121 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc243076g00003 - K05302 gmx:100794971 494.582