Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc243043g00001 ATGCTTTCCACTCTCCCTTCCTCCGATCCTCTTCTTGCTAATCCATTCTCTTCCGCCACCGGCTATGCCGATGGTTGTTTCAGCCTGTGGGACTGCCCTGACCTTTTCACCCCCTCTAAACCAACCAATAGTCCTAAGCCCGTTAGTTCGAGTTCCGGCTCAGATGAACCGAACCAACCCAATGATGAACCGGATATGTCCCATGACCACAAATTGGCCAGACCGGACCGTGTTATGGTTATGGACGAACGGAAGCGCCGGCGAATGATATCGAACCGGGAATCTGCCCGGAGGTCGCGGATGCGCAAGCAGAGGCACCTAGAAAACCTACGGAACCAGTTGAACAAGTGTAGGGTTGAAAACCGGGAACTGAACAACCGGTTGCAGTTCATCCTCCATCACTTGAACCGGATCCGAACCGAAAACCAGTGGCTCCGGTCAGAACGAACCATTTTGTGGCAAAAACTGTCCGACTTTACTCAAATCTTGGTTTTCCAAGAACTGCATCCTTTGGATCATATTTCCACCCTCCCCTGTATGGTGGCCATGCAATAG 555 0.5153 MLSTLPSSDPLLANPFSSATGYADGCFSLWDCPDLFTPSKPTNSPKPVSSSSGSDEPNQPNDEPDMSHDHKLARPDRVMVMDERKRRRMISNRESARRSRMRKQRHLENLRNQLNKCRVENRELNNRLQFILHHLNRIRTENQWLRSERTILWQKLSDFTQILVFQELHPLDHISTLPCMVAMQ 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc243043g00001 184 PANTHER BZIP TRANSCRIPTION FACTOR 44 40 166 - -
Stsc243043g00001 184 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 82 145 IPR004827 GO:0003700|GO:0006355
Stsc243043g00001 184 SMART brlzneu 80 144 IPR004827 GO:0003700|GO:0006355
Stsc243043g00001 184 MobiDBLite consensus disorder prediction 38 78 - -
Stsc243043g00001 184 MobiDBLite consensus disorder prediction 38 60 - -
Stsc243043g00001 184 SUPERFAMILY Leucine zipper domain 84 134 IPR046347 GO:0003700|GO:0006355
Stsc243043g00001 184 CDD bZIP_plant_GBF1 85 136 IPR045314 GO:0003700|GO:0006355
Stsc243043g00001 184 Coils Coil 93 127 - -
Stsc243043g00001 184 Gene3D - 82 134 - -
Stsc243043g00001 184 FunFam BZIP transcription factor 82 133 - -
Stsc243043g00001 184 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 87 102 IPR004827 GO:0003700|GO:0006355
Stsc243043g00001 184 MobiDBLite consensus disorder prediction 61 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc243043g00001 Stsc-Chr243043 2652 3206 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc243043g00001 1 158 bZIP Transcription Factor Family AT4G37730 37.327 9.35e-26 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc243043g00001 - - ahf:112800711 316.235