Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc242g00005 ATGAAGGATTGTGTGAAGATGCTGAAGAACAAAGGATATGGCAAAGTAGAAGAAGAGAATGAGAGTAACCAAATCCAAGATCAACACAAACATTATTCTTATTATTCCAAGTCCTTAATCGCTACTCTCTCCACCCTCGCTTTCCTCTTTCTCACTCTCCTCTTCGTCGTCGCCCTCGTCCACCACAAGCCCCCCGAGTCACCCACCGAGTCCATCCGAGTCGCCTGCAACGTCACTCGTTATCCCAACTCTTGCTTTACCAGCTTAACCTCCTTCCTCAGCAACACCACCACCACCACCACAACCACCAAATCCATGGATCCACAAGGTATCTTGTCCCTCTCCCTCCGAGTCTCCATCCACGAGCTCTCTAATCTCGCCTCCTCCTCCTCCCTCTCCGTTGACTGCAAGGAGCTCGTGGATGACGCCATCTCCCGCCTCAATGACTCCCTCTCGAAGGTGGTGAAGGCGTCAGCAAAGGGGCTGACGGAGGTGGAGATGGCGGACGCGCGCACTTGGGTGAGCGCCGCCTTGACTGACCAGCAGACGTGCCTGGACGGACTGGAGGAGATGGGGTCCTCCAACGCTACTGATGTGAAGACCAAGATTGACAGGTGCGGTGAGTACACCAGCAACGCCTTGGCCATTCTTGCCAATATTAAAGTCTTAGCTTGA 675 0.5348 MKDCVKMLKNKGYGKVEEENESNQIQDQHKHYSYYSKSLIATLSTLAFLFLTLLFVVALVHHKPPESPTESIRVACNVTRYPNSCFTSLTSFLSNTTTTTTTTKSMDPQGILSLSLRVSIHELSNLASSSSLSVDCKELVDDAISRLNDSLSKVVKASAKGLTEVEMADARTWVSAALTDQQTCLDGLEEMGSSNATDVKTKIDRCGEYTSNALAILANIKVLA 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc242g00005 224 Pfam Plant invertase/pectin methylesterase inhibitor 71 216 IPR006501 GO:0004857
Stsc242g00005 224 PANTHER PECTINESTERASE INHIBITOR-LIKE 47 216 - -
Stsc242g00005 224 NCBIfam pectinesterase inhibitor domain 47 219 IPR006501 GO:0004857
Stsc242g00005 224 CDD PMEI-like_3 75 220 - -
Stsc242g00005 224 Gene3D Invertase/pectin methylesterase inhibitor family protein 68 221 IPR035513 -
Stsc242g00005 224 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 71 219 IPR035513 -
Stsc242g00005 224 SMART PMEI_2 67 216 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc242g00005 Stsc-Chr242 51747 52817 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc242g00005 64 220 Carbohydrate Esterase AT1G53840 34.807 4.14e-25 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc242g00005 - - aip:107619071 283.108