Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc242979g00002 ATGATGGGACGGTTACCACACCCCACGAGAAAGCTGGGAAAGACAATAGAAGAGAGGGGTCTTGTGGAACAATGGCTTGAAGTTGAATCCCACAATTTCCAACCTCCAATCCACAACTTAGTCATAAATGTTCTGTTTTCCCCAATTCTGGGTGTTCCCTCGGACGCAAAAGCGGTTCAAGAGAGCAACGAAAAGATTGCAAAGGTGCTTGACATTTACGAGGAGAGGTTGTTGAAGGCAAAGTACTTAGCCGGGGATTTCTTCAGCCTTGCTGATCTTAGCCATCTCCCGTTTGGTCATTATCTGGTGAACCAAACTGGGAGAGGGAATTTGGTTAGAGAAAGGAAGCATGTGAGTGCTTGGTGGGATGATATTAGTAACAGGCCTTCTTGGAAGAAGGTTCTTGAACAATACAAGTTTCCTGTCTAA 429 0.4522 MMGRLPHPTRKLGKTIEERGLVEQWLEVESHNFQPPIHNLVINVLFSPILGVPSDAKAVQESNEKIAKVLDIYEERLLKAKYLAGDFFSLADLSHLPFGHYLVNQTGRGNLVRERKHVSAWWDDISNRPSWKKVLEQYKFPV 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc242979g00002 142 PANTHER GLUTATHIONE S-TRANSFERASE RHO 16 137 - -
Stsc242979g00002 142 Pfam Glutathione S-transferase, C-terminal domain 33 129 IPR004046 -
Stsc242979g00002 142 CDD GST_C_Phi 17 135 IPR034347 -
Stsc242979g00002 142 SUPERFAMILY GST C-terminal domain-like 12 140 IPR036282 -
Stsc242979g00002 142 FunFam Glutathione S-transferase F2 13 135 - -
Stsc242979g00002 142 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 15 142 IPR010987 -
Stsc242979g00002 142 Gene3D - 13 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc242979g00002 Stsc-Chr242979 6730 8098 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc242979g00002 12 142 Glutathione S-transferase Gene Family AT2G30870 58.015 8.37e-57 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc242979g00002 K00799 - gmx:100499911 236.498