Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc242926g00004 ATGGATTCTGAGAATTTTGTTGATTGTTGTCCTGATATCATTGATGAAGATTCTTCAGAGATTTTGAGAGAATTGACTAATGTTAGTCAGGAACAACATCATGAAGTTCCTTCTACTGAACAAGCCCTTCAGCATGAAGAGCTACCAGATCATTCTAATCTATGTGAGGCTGAAATTCCAAAACAGGGCATGTCTTTTCAATCTTGTGGTGAAGCTCATGGATTTTATAAGAACTATGCTTTCAAAGTGGGTTTTTTAGTCAAAATCAAGACCACTAATTATGTTCAGAATGTTAATGGAGAGAAGATTGCAAACCAATCTATTCATTGTAACAAGCATGGCAATCGGACTTCTCGTGTACTTGCTCCCATCAGATCTAAGAAGATTTCATCAGAAAAGTGCAAGGCTAGGGTTTATGTGAAGTTGGACAAAGAAAAAAGGACTTGGTTTTATGCAATATTTGAGGCAAAGCACACACATGCTTGTTCTCCTCAAAAGTCTCTTCATTCCATGAGTACATGGAATTAA 528 0.3674 MDSENFVDCCPDIIDEDSSEILRELTNVSQEQHHEVPSTEQALQHEELPDHSNLCEAEIPKQGMSFQSCGEAHGFYKNYAFKVGFLVKIKTTNYVQNVNGEKIANQSIHCNKHGNRTSRVLAPIRSKKISSEKCKARVYVKLDKEKRTWFYAIFEAKHTHACSPQKSLHSMSTWN 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc242926g00004 175 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 15 168 - -
Stsc242926g00004 175 Pfam FAR1 DNA-binding domain 75 163 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc242926g00004 Stsc-Chr242926 9759 10792 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc242926g00004 FAR1 4.1e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc242926g00004 - K17604 ahf:112709416 124.79