LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Stsc242889g00001	ATGGGCTGGCTTAATTGGGCCATTGAAAGCAAATGGAAGGAGCCGGTGGCTTTTGGTTCTTCGTGTTGGAGTATCAACGAGGTAATGTCGAAGGGTCTCTTCGTGTGTTTGATGGGATTGATCTTCAAGCAGCAATACAGCGACTGCAATCTTTCCTTTCTGATAAACCACCCAGGAAAGGAGGTGGCTCATCTTTCACATGCTACTAGTAAGTGCAAGCGTGTGCTTGATGCTGTTGAGAAGATGTTTTCTCAGGGTATATCCAATGCTCAAGTGGACAATAAATTGCAAGAGATAGTTAGCCATGTCGTAGAGCTCCTTGCAGAGCTTTGGAAACAGGCCGGTTACTATCCGAAGGCAATATCTGCATATAAGAATGCCCTTTTTAGTCAATGGAACCTTGATAATGATTGTTGTGCAAGAATTCAGAAAGTATTTGCTATGTTTTTGCTGAATACTGGGGTGGAGGCAAATCCTCCCAGTTTGGCAGTTCAAACTAAAGGCTCATATGTACCTAAAAATAAACTGGAAGAGGCAATTCTGCTTCTAGTGATTCTTGTGAGAAAGTTGTCTTGGTAA	579	0.4266	MGWLNWAIESKWKEPVAFGSSCWSINEVMSKGLFVCLMGLIFKQQYSDCNLSFLINHPGKEVAHLSHATSKCKRVLDAVEKMFSQGISNAQVDNKLQEIVSHVVELLAELWKQAGYYPKAISAYKNALFSQWNLDNDCCARIQKVFAMFLLNTGVEANPPSLAVQTKGSYVPKNKLEEAILLLVILVRKLSW	192

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Stsc242889g00001	192	PANTHER	PROTEIN NPG1	62	191	IPR043376	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Stsc242889g00001	Stsc-Chr242889	859	1867	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Stsc242889g00001	60	179	Calmodulin-binding Proteins	AT2G43040	65.000	1.63e-51	174

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Stsc242889g00001	K21843		-	gmx:100811897	187.578