Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc242842g00001 GCTTTGATATTCAGGTACATGTTGGCCGGTGCAGCTGTTCCTCCTGAGCTCCTTCAACCAATCAAGAAAAGCCTCTTCCATTCTTCTCCCTATTTCCTCCATCACTCTCTCCAACACTATCAACCTGCAGCTCGTAAGTTCCTATTACTATCATCACCCACTACAAGAGTTTTGTCAGATGGCGGAAAACCGCCGCTAAACGGAAGTGTTAATGTTACATTGGGTGGTGGTTTTGCGGCGGTTTTGCCATAA 252 0.4643 ALIFRYMLAGAAVPPELLQPIKKSLFHSSPYFLHHSLQHYQPAARKFLLLSSPTTRVLSDGGKPPLNGSVNVTLGGGFAAVLP 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc242842g00001 83 ProSiteProfiles QLQ domain profile. 1 23 IPR014978 GO:0005524|GO:0005634|GO:0006355
Stsc242842g00001 83 Pfam QLQ 1 21 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc242842g00001 Stsc-Chr242842 768 1019 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc242842g00001 1 43 GRF Transcription Factor Family AT2G36400 78.723 4.69e-15 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc242842g00001 - - aip:107648821 93.9745