Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc242803g00001 ATGGGTGTTTGTCTAAGCGGCCTAGGTAAATCGGAGAGCCGCAAGGACACTGGGGTGAACTCAAAGTATGTGCGCACAAATGAGAATGATCTCGGTAATACAAACGTTCCTTCTACCACAACGCGACCAACTCCAACGAGTGAGGGAGAGATCTTGCACTGTTCAAAATTAAAGAGCTTTAGTTTTTCAGAACTGAAGACAGCCACGAGAAACTTCCATCGGAACAATCTGCTAGGAGAAGGTGATTTCGGTTCTGTTTTTAAGGGTTGGGTTAATGAGAATTCGTTGGTGGCTGCCAAACCTGGCACTGGTGTTGTTATTGCTGTGAAGAGACTTTATCAACATGGCTTAGAGGGTGACAGTGAGTGGTTGGCTGAAGTAAACTATCTGGGACAATTTTCTCATTCTCATCTGGTGAGACTGATTGGATATTGCCTTAAAGATAAACACCGCCTTCTCGTTTTCGAGTATATGTCTCGCGGCAGCTTGGAGAATCATCTGTTCAGGCAATTACAATGCAAAACTTTCGGTTTCCGGGCTGGCAAAGGATGGATTCAGATACGAAAACACTAA 573 0.445 MGVCLSGLGKSESRKDTGVNSKYVRTNENDLGNTNVPSTTTRPTPTSEGEILHCSKLKSFSFSELKTATRNFHRNNLLGEGDFGSVFKGWVNENSLVAAKPGTGVVIAVKRLYQHGLEGDSEWLAEVNYLGQFSHSHLVRLIGYCLKDKHRLLVFEYMSRGSLENHLFRQLQCKTFGFRAGKGWIQIRKH 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc242803g00001 190 MobiDBLite consensus disorder prediction 22 48 - -
Stsc242803g00001 190 SUPERFAMILY Protein kinase-like (PK-like) 45 172 IPR011009 -
Stsc242803g00001 190 ProSiteProfiles Protein kinase domain profile. 72 190 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc242803g00001 190 ProSitePatterns Protein kinases ATP-binding region signature. 78 110 IPR017441 GO:0005524
Stsc242803g00001 190 FunFam Serine/threonine-protein kinase BIK1 38 157 - -
Stsc242803g00001 190 Gene3D Phosphorylase Kinase; domain 1 43 157 - -
Stsc242803g00001 190 MobiDBLite consensus disorder prediction 1 48 - -
Stsc242803g00001 190 PANTHER OS01G0588500 PROTEIN-RELATED 38 172 - -
Stsc242803g00001 190 Pfam Protein tyrosine and serine/threonine kinase 75 170 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc242803g00001 Stsc-Chr242803 4727 6800 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc242803g00001 48 168 Glycoside Hydrolase AT3G07070 47.107 1.11e-30 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Stsc242803g00001 PK_Tyr_Ser-Thr 2.2e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc242803g00001 - - gmx:100798404 228.024