Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc242781g00003 ATGGCTGAAAAACTGTATGGTGGAGCTTACCTCTCTCCCTTTGTTGATGCTGTTTTGGACAACCTGACTTCAATACTTGAAGAAGAAGACTCATCCCCCGAAAGGAACAACTTGCTTCTAAGGTTGCGGAATTGTCTCTATGAGGTTGGACCTGTTCTTGATGATGCTGAGTTGAAGCAGTTCACTGACAAGAGAGTCAAGAAGTGGCTTGTTGATCTCCAAGATTCTCTCTATTTTGCTGATGACTTGCTCGATGAACTCTCCACTAAAGCCGCCATTGCTGCCACTCAAGGGGATCAAGGTAACTCTTCTTGCTGGTCTCGTCTCGTTGATTCATATATTGAAGATACTGGTGACTTGGAAAGAATAGTTGGAAGAGTAGATTCTGTTGTAGCACGCAAAAGTTATCTTCGTTTGAAGGAGACTGCCAAGGTGGACATGTCATGGAGAATTCCAACCACATCTCTGGTTGAACCATCTGAGGTATGCGGCAGGAAAGAAGACAAGGAGGCCATATTGAAACTGTTGTTGCATGATGATGATACTGCTGATGCTGATTTATCTGTGATTCCCATTGTTGGCATGGGTGGAATAGGAAAGACCACTTTGGCCCAATTGATTTACCATGATGACAAACTGAAGGAGATGTTTGATTTTCGAGGTTGGGTTTGTGTGTCTGAAGAGTTTGATGTTGTCAAGGTCACCAAGGCTATAATCGAGGCAATAACTTCGATTCCTTGTAACTTGACAGATTTGAATTTACTTCAACATGAGTTAAAGGAAAAGTTGTCCAGGAAAAAGTTCTTTGTTGTCTTGGACGACGTATGGAAAGAAAATTATGATGATTGGAATATGCTTCTAAAACCTTTTCAGAAAGGGGTTAAGGGAAGTAAAATTCTCATCACTACTAGAAGTAAAAAAGTGGCTTCTGTGGTCGAAACTGTTTCACCTCATGAACTTAGGTTATTGTCTCATGAAGATTGTTGGTTGGTGTTTTCAAAACATGCACGTCTTTCAACTGCTTCTATGGAGAATCCAACCCTGGTAAAAATCGGCAAAGATATCATAAAGAAGTGCGATGGATTGCCCTTGGCAGCTCAAGCCCTTGGGAGTCTATTGCGTGGAAATTCTGATGTCAAGCATTAG 1146 0.4162 MAEKLYGGAYLSPFVDAVLDNLTSILEEEDSSPERNNLLLRLRNCLYEVGPVLDDAELKQFTDKRVKKWLVDLQDSLYFADDLLDELSTKAAIAATQGDQGNSSCWSRLVDSYIEDTGDLERIVGRVDSVVARKSYLRLKETAKVDMSWRIPTTSLVEPSEVCGRKEDKEAILKLLLHDDDTADADLSVIPIVGMGGIGKTTLAQLIYHDDKLKEMFDFRGWVCVSEEFDVVKVTKAIIEAITSIPCNLTDLNLLQHELKEKLSRKKFFVVLDDVWKENYDDWNMLLKPFQKGVKGSKILITTRSKKVASVVETVSPHELRLLSHEDCWLVFSKHARLSTASMENPTLVKIGKDIIKKCDGLPLAAQALGSLLRGNSDVKH 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc242781g00003 381 FunFam Probable disease resistance protein At1g61300 148 316 - -
Stsc242781g00003 381 Gene3D - 15 123 - -
Stsc242781g00003 381 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 147 376 IPR027417 -
Stsc242781g00003 381 PANTHER DISEASE RESISTANCE PROTEIN RP 37 378 IPR044974 GO:0006952
Stsc242781g00003 381 Gene3D - 144 316 IPR027417 -
Stsc242781g00003 381 PRINTS Disease resistance protein signature 189 204 - -
Stsc242781g00003 381 PRINTS Disease resistance protein signature 262 276 - -
Stsc242781g00003 381 PRINTS Disease resistance protein signature 359 373 - -
Stsc242781g00003 381 Pfam Rx N-terminal domain 14 94 IPR041118 -
Stsc242781g00003 381 Pfam NB-ARC domain 166 375 IPR002182 GO:0043531
Stsc242781g00003 381 Gene3D - 322 381 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc242781g00003 Stsc-Chr242781 8679 11529 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc242781g00003 186 375 WRKY Transcription Factor Family AT5G45050 28.293 6.67e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc242781g00003 - - adu:107476306 617.846