Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc242778g00002 ATGATGTGGACCCAATTGAATTGGTTGTCTGGCTTCCAGCATTGTGTAGGAAGATGGAAATTCCATAATGCATTGTCAAGGGCAAGGCTTGCCTTGGTTCGGCTAAACTTCAACGACAAGTTCGACGAGTATAAAAAGAAATGGGGTGGCGGTATCATGGGTTCCAAATCCCAAGCCAAAACTAAAGCCAAGGAGAGGCTTCTCGCTAAGGAGGCTGCTCAAAGGATGACTTAG 234 0.4615 MMWTQLNWLSGFQHCVGRWKFHNALSRARLALVRLNFNDKFDEYKKKWGGGIMGSKSQAKTKAKERLLAKEAAQRMT 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc242778g00002 77 Gene3D - 21 71 IPR029064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc242778g00002 Stsc-Chr242778 5425 5951 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc242778g00002 30 76 Cytoplasmic Ribosomal Protein Gene Family AT2G47610 78.723 1.45e-20 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc242778g00002 K02936 - qsu:112034677 78.9517