Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc242759g00003 ATGATTTTCTTGCAAATTGGTATGGCAGGGAATTACATCTTCGGCAAAGACGTGCTTAATCATGGTATGAGTCGTTTTGTCTTCATTTTCTATCGCAATGCCATGGCTGCACTTGTACTTGCTCCCTTTGCATTAATCATTGAAAGGAAAAGTAGGCCCAAAATGACAGTCCCAGTTTTTCTGCAAATAATGATCCTGGGATTTCTTGAGCCAGTTTTCAATCAAAACTTCACGTATCTGGGAATGAAGTACACATCTGCTTCATTCACATCTGCTATCATGAATGCAGCACCATCAATCACCTTTGTGCTTGCTCTTCTTACCGGGTTGGAGCATGTAAAAATAAGAGAAGTTCGGAGCCAAGCAAAAGTGATTGGAACACTAGTAACATTCGCAGGAGCTGTGATAATGGCAGTTTACAAAGGTCCTGGATTCAATCTCTTTCATTCTGCAGCAACAACAGAGAACAATGGAGATGTAGGACCCACCTCACAGGATCACCATAGTGTTGGAGCTATTTACATTCTCTTGGGTTGTGTGGCCTTGTCTTCTTTCTACATATTGCAGAGCATAACCATAAAGAAGTATCAAGCGGAGTTATCATTAGCAACATGGATATGCATGTCAGGATCATTGCAAACTGCAATTGTAGCAGTTATTGCAGAGCGTCACTCTGGTCCTAAGGCTTGGGCTCTTGGTTGGGACATAAGGCTCTATGCTCCTCTTTACACGGGAATGGTTAGTTCAGCAATTGCATACTACATTCAAGGATTGGTTATGAACTTGAAAGGTCCTGTGTTCACAACAGCTTTCAATCCTCTTTGCATGGTCGTTGTTGCTGCTTTAGGTTCCTTCTTCTTACGAGAACGACTCTTTCTTGGAAGTATTATTGGAAGCATCATCATCACAATAGGACTTTACTCAGTTTTGTGGGGAAAAGCTAAGGATAACGCACACAAACCCAAAATACAAGCTGATGAGGAGAATCCAAGGCCATTGCAATAA 1005 0.4169 MIFLQIGMAGNYIFGKDVLNHGMSRFVFIFYRNAMAALVLAPFALIIERKSRPKMTVPVFLQIMILGFLEPVFNQNFTYLGMKYTSASFTSAIMNAAPSITFVLALLTGLEHVKIREVRSQAKVIGTLVTFAGAVIMAVYKGPGFNLFHSAATTENNGDVGPTSQDHHSVGAIYILLGCVALSSFYILQSITIKKYQAELSLATWICMSGSLQTAIVAVIAERHSGPKAWALGWDIRLYAPLYTGMVSSAIAYYIQGLVMNLKGPVFTTAFNPLCMVVVAALGSFFLRERLFLGSIIGSIIITIGLYSVLWGKAKDNAHKPKIQADEENPRPLQ 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc242759g00003 334 SUPERFAMILY Multidrug resistance efflux transporter EmrE 234 314 - -
Stsc242759g00003 334 SUPERFAMILY Multidrug resistance efflux transporter EmrE 31 141 - -
Stsc242759g00003 334 PANTHER WAT1-RELATED PROTEIN 1 317 IPR030184 GO:0016020|GO:0022857
Stsc242759g00003 334 Pfam EamA-like transporter family 6 137 IPR000620 GO:0016020
Stsc242759g00003 334 Pfam EamA-like transporter family 171 310 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc242759g00003 Stsc-Chr242759 5302 7441 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc242759g00003 1 332 Nodulin-like Gene Family AT2G37460 47.305 6.96e-117 341
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc242759g00003 - - gmx:100786326 469.929