Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc242759g00002 ATGAAGTACACATCTGCTTCATTCACATCTGCTATCATGAATGCAGCACCATCAATCACCTTTGTGCTTGCTCTTCTTACCGGGTTGGAGCATGTAAAAATAAGAGAAGTTCGGAGCCAAGCAAAAGTGATTGGAACACTAGTAACATTCGCAGGAGCTGTGATAATGGCAGTTTACAAAGGTCCTGGATTCAATCTCTTTCATTCTGCAGCAACAACAGAGAACAATGGAGATGTAGGACCCACCTCACAGGATCACCATAGTGTTGGAGCTATTTACATTCTCTTGGGTTGTGTGGCCTTGTCTTCTTTCTACATATTGCAGAGCATAACCATAAAGAAGTATCAAGCGGAGTTATCATTAGCAACATGGATATGCATGTCAGGATCATTGCAAACTGCAATTGTAGCAGTTATTGCAGAGCGTCACTCTGGTCCTAAGGCTTGGGCTCTTGGTTGGGACATAAGGCTCTATGCTCCTCTTTACACGGGAATGGTTAGTTCAGCAATTGCATACTACATTCAAGGATTGGTTATGAACTTGAAAGGTCCTGTGTTCACAACAGCTTTCAATCCTCTTTGCATGGTCGTTGTTGCTGCTTTAGGTTCCTTCTTCTTACGAGAACGACTCTTTCTTGGAAGTATTATTGGAAGCATCATCATCACAATAGGACTTTACTCAGTTTTGTGGGGAAAAGCTAAGGATAACGCACACAAACCCAAAATACAAGCTGATGAGGAGAATCCAAGGCCATTGCAATAA 762 0.4226 MKYTSASFTSAIMNAAPSITFVLALLTGLEHVKIREVRSQAKVIGTLVTFAGAVIMAVYKGPGFNLFHSAATTENNGDVGPTSQDHHSVGAIYILLGCVALSSFYILQSITIKKYQAELSLATWICMSGSLQTAIVAVIAERHSGPKAWALGWDIRLYAPLYTGMVSSAIAYYIQGLVMNLKGPVFTTAFNPLCMVVVAALGSFFLRERLFLGSIIGSIIITIGLYSVLWGKAKDNAHKPKIQADEENPRPLQ 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc242759g00002 253 PANTHER WAT1-RELATED PROTEIN 1 236 IPR030184 GO:0016020|GO:0022857
Stsc242759g00002 253 SUPERFAMILY Multidrug resistance efflux transporter EmrE 153 233 - -
Stsc242759g00002 253 Pfam EamA-like transporter family 90 229 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc242759g00002 Stsc-Chr242759 5302 7441 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc242759g00002 1 251 Nodulin-like Gene Family AT2G37460 45.455 1.56e-81 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc242759g00002 - - ahf:112706078 398.667