Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc242759g00001 ATGTTGAGTGCTAGTAGTATTGGCCTCATAGTGAGGAAGGCAAAACCATACCTGTTAATGATTGGGTTGCAATTTGGTATGGCTGGAAATTACATCTTCGGAAAAGACATTCTTAACCACGGAATGAGCCGTTTTGTTTTCATTGTTTATCGCAATGCCATGGCTGCTGCTGCACTTGCCCCTTTCGCCTTCCTTCTTGAAAGGAAAAGCAGGCCCAAGATGACACTTGCCATCTTTCTTCGGATTATGATCCTTGGATTTCTTGAGCCGGTTTTCAATCAAAGCTTCACTTACTTAGGAATGAAGTATACTTCGGCTTCATTCACATCTGCGATTATGAATGCCGTCCCATCCATTACCTTTGTTCTTGCAGTTCTTGCTCGGATGGAGCATGTAAAATTAAAAGAAGTTCGAAGTCAAGCGAAAGTAATTGGAACCTTAATAACATTTGGAGGTGCTGTGTTAATGGGAATTTACAAAGGTCCTGGATTCAACCTTTTTCATTCTAGAACAGAACAACACCAGGGTGTTAATAGAGACCCCTCCTCATCACACCACCACCAAATCGAAGGAGCTCTTTACATTTTCATGGGTTGTGTGGCTTTATCTTCTTTCTACATATTACAGACGATCACGGTAAAGAAGTATCCGGCGGAGTTGTCATTGGCGACCCTAATATGTATGGCAGGAACAGGGCAAGCTACGGTGGTGGCACTTGTAGCTGACCATCACTCCAAAGCTTGGGCTATTGGTTGGGATTACAGGCTCTATGCTCCTCTTTATACGGGATTGGTTAGCTCAGGAATTGCATACTATGTTCAAGGAATGGTTATGAAAATGAGAGGCCCTGTATTTACAACAGCTTTCAATCCACTTTGTATGATTATTGTTGCTGCTTTGGGTTCCCTCCTATTAGGAGAAAGACTTTATCTTGGAAGTATTATTGGAAGCATCATCATAACAATGGGCCTTTACTCGGTTGTATGGGGCAAAGCCAAAGACCATAGAGAGGGAGCAGCAGTAGCAGAGAGGGAAGAAACAAATTTAAAATCACTTCCCATTACAGTAACCAATAATGATTCAAAAATTGATCTATCAAATGCGCACAAATTAGAGGATTACAACAACATACATACAATAATATAA 1146 0.4127 MLSASSIGLIVRKAKPYLLMIGLQFGMAGNYIFGKDILNHGMSRFVFIVYRNAMAAAALAPFAFLLERKSRPKMTLAIFLRIMILGFLEPVFNQSFTYLGMKYTSASFTSAIMNAVPSITFVLAVLARMEHVKLKEVRSQAKVIGTLITFGGAVLMGIYKGPGFNLFHSRTEQHQGVNRDPSSSHHHQIEGALYIFMGCVALSSFYILQTITVKKYPAELSLATLICMAGTGQATVVALVADHHSKAWAIGWDYRLYAPLYTGLVSSGIAYYVQGMVMKMRGPVFTTAFNPLCMIIVAALGSLLLGERLYLGSIIGSIIITMGLYSVVWGKAKDHREGAAVAEREETNLKSLPITVTNNDSKIDLSNAHKLEDYNNIHTII 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc242759g00001 381 PANTHER WAT1-RELATED PROTEIN 15 343 IPR030184 GO:0016020|GO:0022857
Stsc242759g00001 381 SUPERFAMILY Multidrug resistance efflux transporter EmrE 236 333 - -
Stsc242759g00001 381 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 159 - -
Stsc242759g00001 381 Pfam EamA-like transporter family 15 156 IPR000620 GO:0016020
Stsc242759g00001 381 Pfam EamA-like transporter family 191 328 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc242759g00001 Stsc-Chr242759 1611 4586 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc242759g00001 12 361 Nodulin-like Gene Family AT2G37460 47.443 2.42e-118 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc242759g00001 - - ccaj:109808977 514.227