Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc242757g00004 ATGACTTTCAAGCGCAGAAACGGCGGCAGAAACAAGCATGGCCGCGGCCACGTCAAATTCATCCGCTGCTCCAACTGCGGCAAGTGCTGCCCCAAGGACAAATCGATCAAGCGGTTTCTTGTGAGGAACATTGTTGAGCAAGCTGCAGTTCGTGATGTTCAGGAAGCCTGCGTCTACGAACAATACACGCTTCCGAAGCTGTACGTGAAGATGCAGTACTGTGTTTCCTGTGCCATCCACTCTCACGTTGTGAGGGTGCGTTCTCGCACCGATAGGAGGAACCGCGAGCCTCCACAGCGCTTTGCCAGGCGCAGGGATGATGCACAAAGGCCTGGTCCTGGTCAAGCACCTCGTCCCGCCGGTGGAGTAGGAGCTGCTCCTCGTGCTTAA 390 0.5615 MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKSIKRFLVRNIVEQAAVRDVQEACVYEQYTLPKLYVKMQYCVSCAIHSHVVRVRSRTDRRNREPPQRFARRRDDAQRPGPGQAPRPAGGVGAAPRA 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc242757g00004 129 PANTHER 40S RIBOSOMAL PROTEIN S26 1 122 IPR000892 GO:0003735|GO:0005840|GO:0006412
Stsc242757g00004 129 Gene3D Ribosomal protein S26e 1 115 IPR038551 -
Stsc242757g00004 129 ProSitePatterns Ribosomal protein S26e signature. 73 80 IPR000892 GO:0003735|GO:0005840|GO:0006412
Stsc242757g00004 129 FunFam 40S ribosomal protein S26 1 115 - -
Stsc242757g00004 129 MobiDBLite consensus disorder prediction 85 129 - -
Stsc242757g00004 129 Pfam Ribosomal protein S26e 1 106 IPR000892 GO:0003735|GO:0005840|GO:0006412
Stsc242757g00004 129 MobiDBLite consensus disorder prediction 89 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc242757g00004 Stsc-Chr242757 15560 17016 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc242757g00004 1 115 Cytoplasmic Ribosomal Protein Gene Family AT3G56340 82.759 3.39e-66 195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc242757g00004 K02976 - qsa:O6P43_020111 196.438