Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc242746g00004 ATGGCATCATCAAGCTCATATAATTCACCTTGTGCTGCCTGCAAATTCTTGAGGAGGAAGTGCATGCCAGGCTGTATCTTTGCGCCTTACTTTCCACCTGAAGAGCCTCAAAAGTTTGCAAACGTGCACAAGATCTTCGGTGCCAGCAATGTTACCAAGCTTCTCAACGAGCTTCTGCCTCATCAGAGGGAGGACGCGGTCAACTCCCTCGCGTACGAGGCAGAAGCTCGTGTGAGAGATCCCGTTTATGGATGTGTTGGTGCCATTTCTTTCCTTCAGAGACAAGTCCAGAGGCTTCAGAAGGAGCTTGATGCCGCCAATGCGGATCTTCTCCGGTATTCCTTCGCCGACATCGCTCCAACGCCGATGCCTCCCGGACTAACTAATAATGCTACTTCCATACAACAAATTCCCCAAAGGTTTGGTGCAAGATTTGGTAACGAAGGAAATGGGTTCTATAACAATAATCGCCAGTATTCTCCTAATCTTTATTCTTATCCTTACTCTCTTCCATGGACGGATACCTCTTCAGAGGATATCAGCAATGGAGGAGGGATAGGAGGCGGAGCAGGAGGAGGAGTTTTCATCATCGTCATCTTCTTCAATTCCCGTGAAACTGTTGAGCCTCTCGCTATCTCCAAATATATTTCTTCAATCAAGAAAGATATATCTGAAATAGGTACCCAATTCCAAACTGTTGATACAGTGGAAGCATCATGA 720 0.4639 MASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPHQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLLRYSFADIAPTPMPPGLTNNATSIQQIPQRFGARFGNEGNGFYNNNRQYSPNLYSYPYSLPWTDTSSEDISNGGGIGGGAGGGVFIIVIFFNSRETVEPLAISKYISSIKKDISEIGTQFQTVDTVEAS 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc242746g00004 239 Coils Coil 89 109 - -
Stsc242746g00004 239 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 8 133 - -
Stsc242746g00004 239 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
Stsc242746g00004 239 Pfam Lateral organ boundaries (LOB) domain 10 107 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc242746g00004 Stsc-Chr242746 14782 18189 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc242746g00004 1 119 AS2 family AT5G63090 90.833 1.14e-75 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Stsc242746g00004 LOB 5.2e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc242746g00004 - - ahf:112722314 337.806