Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc242744g00001 ATGGATGCTATTAATTACTCGATCATTTCTCAATCTTCTTCTGAAACAGAATCGATAATCCAGTTTTTAGGTAACATCGATGAGGATTATATTCCAAAGGCTGGAATGGCTTTTCCAACACTTGAAGAAGCTGTTGCTTTTTATAAAGAGTATGCTAAACATGTTGGGTTTTCTACTAAGATAAGGAACACGAATAGGTGCAAGGAGACCAAGGAAATAAAGAATCAACTCATTACATGTAACAGAGAGGGGAAATGGATTTCTGAGATACCGTATGTTGAGAAGACGAATCCTATATGTGGTGCAAACTGTCTTACAAGGATTTATGTGCACGTAGTGAAGAAAACCAGACGAAAAAGAGCAAAAGGAAGCTTGGAAAGCAAGAAAGAGGAAAACAGAGTTAAAAGAGCAAAAACAGAGCTACAGTACCAATCCAGAGTGCTCACGCCTAGGCGCTACTACCCACGCCTAGGCATGGCCAAGCCACCCTCACCATTTAGCCTCATCCATCACCCAACGCCTAGGCGTGATGCTAGATGCCTAGGCGTGGATGAAGCAGCAAGGAAGATGACCTTGCACCAAGGCCTCAACGCCTAG 597 0.4288 MDAINYSIISQSSSETESIIQFLGNIDEDYIPKAGMAFPTLEEAVAFYKEYAKHVGFSTKIRNTNRCKETKEIKNQLITCNREGKWISEIPYVEKTNPICGANCLTRIYVHVVKKTRRKRAKGSLESKKEENRVKRAKTELQYQSRVLTPRRYYPRLGMAKPPSPFSLIHHPTPRRDARCLGVDEAARKMTLHQGLNA 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc242744g00001 198 Pfam FAR1 DNA-binding domain 47 112 IPR004330 -
Stsc242744g00001 198 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 21 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc242744g00001 Stsc-Chr242744 695 1836 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc242744g00001 FAR1 1.7e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc242744g00001 - K17604 adu:110280446 112.849