Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc242742g00002 ATGTCTTCCAACAAGAAACAAGCTCTTTTCAAAACTGTATTCACAGTAAACGGTAGCTGTGGCTGTGGCAAAACAAAGGCCTTAGAGGTACACGATCCAACGCCAAAACCCAAAATCTCCATTCACCAGAACACAAGCAGCATGGCTTCTTCATTCACCACTACTTCGCACAACGGTGGTGCCGAGGACGAAGATACCTCCACCACAATCTCCGATGAACATAGCAGCAATAACCTTATTGTCTCCAAACGAAGCCCTCTCATGGATACACTTGCAGTTGAGAAGGACTCTTCGGACCCATATCATGATTTCCGGCATTCAATGCTCCAAATGATCTTCGAGAAGGAGATTGAATCTAAGGATGATCTTCAGGATCTTCTTCAGTGCTTTCTTCGGTTGAATGCATCTCATTACCATCATATCATCGTTAAGGCCTTCAGTCAGATATGTGAAGAGGCCTTCCCTGAGACCCCTTCTATAAACACAAGATCTTCCTCTTCTTGTAGGAACAGCTTCATCATTCACAAGACTTGCCTATGA 540 0.4426 MSSNKKQALFKTVFTVNGSCGCGKTKALEVHDPTPKPKISIHQNTSSMASSFTTTSHNGGAEDEDTSTTISDEHSSNNLIVSKRSPLMDTLAVEKDSSDPYHDFRHSMLQMIFEKEIESKDDLQDLLQCFLRLNASHYHHIIVKAFSQICEEAFPETPSINTRSSSSCRNSFIIHKTCL 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc242742g00002 179 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Stsc242742g00002 179 NCBIfam uncharacterized plant-specific domain TIGR01568 92 150 IPR006458 -
Stsc242742g00002 179 Pfam Transcriptional repressor, ovate 97 152 IPR006458 -
Stsc242742g00002 179 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 39 153 IPR038933 GO:0045892
Stsc242742g00002 179 MobiDBLite consensus disorder prediction 38 73 - -
Stsc242742g00002 179 ProSiteProfiles OVATE domain profile. 93 152 IPR006458 -
Stsc242742g00002 179 MobiDBLite consensus disorder prediction 32 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc242742g00002 Stsc-Chr242742 5439 5978 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Stsc242742g00002 Ovate 1.3e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc242742g00002 - - adu:107476507 303.908