Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc242706g00003 ATGCACAACCTTGTTGGGTCAATGCCCCATGAAAACCTAAGAAACTTAGCATCAAAATATGGACCCTTAATGCACCTTAAGCTAGGAGAAATCTCCAACATCATAGTTTCTTCACCTGAAATGGCACAAGAGATTATGAAAACTCAAGATCTCAATTTCTGTGATAGGCCAAACCTTCTCTTTCCAAGAATCATTGCTTACAACGGCACAGGCATTGCCTTTGGAAGATATGGAGACTATTGGAGGTATGTACGGAAGATATGCACCATGGAGTTATTAACAACAAAACGTGTTAAATCTTTTAGGCATATAAGGGAAGAAGAGGTTTCAGAGTTGGTCAAAGAAATATCTCAAAGTGAAGGCTCCATTTTTAATCTCACTCAGAAGATTTTCTCAATGACCTACGGAATAGCAGCTAGAGCAGCATTTGGAGAAAATTTTATTGGTGATCTGTATCCTTCAATTAGAATAGTATTTGAAATGATGAGTAGAACGAAGGCTAAGCTTGAAGAACTGCACATAAAGACTGATAAGATATTGCAAGACGTAATAGATGATCATAGAATTAGAGGAAGAAGTGGCAAATGTGAAGAAGAAGGTGAAGATCTTGTTGATGTTCTTCTCAAGTTTCAAGAAAAAGACTCTGAATACCCCTTGACTGATGACAACATCAAAGCAGTCATCCAGGACATGTTTATTGGTGGTGGAGAAACATCCTCATCGGTTGTGGATTGGGCAATGGCTGAAATGATAAAGAAACCAAAAGTGATGGAAAGAGCACAAGCTGAAGTTAGAAGGGTTTATGGTAACAAAGGGTATGTAGATGAATCAGAATTGCACCAATTGATATACCTCAAATGTATCATCAAAGAAACCCTAAGGTTACATCCATCTGTCCCATTGTTAGTTCCAAGAGAGAACAAAGAACCATGCCAAATCAAAGGGTACCAAATTCCAGCCAATTCTAGAATTATTATCAATGCTTGGGCAATTGGAAGAGATCCAAAGTATTGGGATGATGCCATGAATTTTAATCCTGAGAGGTTTCTTGATAATTATTCAATTGATCAAAGAGGCACAAATTTTGAGTTTGTCCCATTTGGTGGTGGAAGAAGAATGTGTCCTGGAATTGCATTTGCTACACCAAACATGGAGTTGCCACTTGCTCAATTTCTTTACCATTTTGATTGGAAGCTTCCCAATGGAATCAAGAATGAGGAACTTGATATGACTGAGTTGTTTGGGATCACCATTAGAAGAAGAAATGATCTCTGCTTGATTCCCATTATTCATCGTCAACCTTAA 1305 0.3793 MHNLVGSMPHENLRNLASKYGPLMHLKLGEISNIIVSSPEMAQEIMKTQDLNFCDRPNLLFPRIIAYNGTGIAFGRYGDYWRYVRKICTMELLTTKRVKSFRHIREEEVSELVKEISQSEGSIFNLTQKIFSMTYGIAARAAFGENFIGDLYPSIRIVFEMMSRTKAKLEELHIKTDKILQDVIDDHRIRGRSGKCEEEGEDLVDVLLKFQEKDSEYPLTDDNIKAVIQDMFIGGGETSSSVVDWAMAEMIKKPKVMERAQAEVRRVYGNKGYVDESELHQLIYLKCIIKETLRLHPSVPLLVPRENKEPCQIKGYQIPANSRIIINAWAIGRDPKYWDDAMNFNPERFLDNYSIDQRGTNFEFVPFGGGRRMCPGIAFATPNMELPLAQFLYHFDWKLPNGIKNEELDMTELFGITIRRRNDLCLIPIIHRQP 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc242706g00003 434 Pfam Cytochrome P450 7 147 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc242706g00003 434 Pfam Cytochrome P450 158 414 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc242706g00003 434 PRINTS E-class P450 group I signature 17 36 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc242706g00003 434 PRINTS E-class P450 group I signature 286 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc242706g00003 434 PRINTS E-class P450 group I signature 243 269 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc242706g00003 434 PRINTS E-class P450 group I signature 374 397 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc242706g00003 434 PRINTS E-class P450 group I signature 41 62 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc242706g00003 434 PRINTS E-class P450 group I signature 364 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc242706g00003 434 PRINTS E-class P450 group I signature 327 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc242706g00003 434 PRINTS E-class P450 group I signature 223 240 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc242706g00003 434 Gene3D Cytochrome P450 1 432 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc242706g00003 434 PANTHER OS08G0105600 PROTEIN 12 432 - -
Stsc242706g00003 434 CDD CYP71-like 19 424 - -
Stsc242706g00003 434 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 367 376 IPR017972 GO:0005506|GO:0016705
Stsc242706g00003 434 FunFam Predicted protein 232 426 - -
Stsc242706g00003 434 SUPERFAMILY Cytochrome P450 5 427 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc242706g00003 434 PRINTS P450 superfamily signature 234 251 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc242706g00003 434 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc242706g00003 434 PRINTS P450 superfamily signature 287 298 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc242706g00003 434 PRINTS P450 superfamily signature 365 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc242706g00003 Stsc-Chr242706 16561 19092 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc242706g00003 1 431 Cytochrome P450 AT1G13110 39.655 2.87e-120 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc242706g00003 - - adu:107496273 738.028