Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc242706g00001 ATGCACCTTAAGCTCGGCGAAACATCGGTCATGGTGGTTTCTTCTCCCGAAGTTGCCAAAGAAGTGTTTAAAAAGTATGACGTCAACTTTTTCGAAAGGCCTAAACATTTAGGTGCAGATATCTTGACCTATGGCTCCACGAACATAGCCACCGCGAGATACGGCGGCTACTGGAAGCAAGTAAAAAAAATAGCCACAATGGAACTTCTTAGCCCTAAGCGTGTGTTTTCATTCAAATCAATAAGGAAAGAAGAAGTAATGAATTTGATAACATGGATTTCTGCTAATAATAAATTTTGTGTTAATCTTAGTGAGAAAGTTGCTTCTTTGACAAGTGTAATCACCGCTAGGGCAATTTTCGGAGAAAAGTGCAAAGACCAAGAAGAATTTATTTTATTGTTGAAGAAGCTTGGAAATATTGTCGAACGAGTATTCGTCGTATTTAGTCTTTTTCCATCTCATACGTGGCTTCATTTTATTAGTGGAGCCAAGTGTGAAACAGAAAAAGTACATAAAGAATTTGATGTCATTATTGAAAATATCATAAAAGAAAAAGTAAAGAGAATGAAAAATGGTGGTGATGAATCTAAAACGGAAGATCTTCTTTCTATTCTCCTAAATATTGTTGAAGATCATGGAGCCTACGAGTACCCTGTGACAATCAACAGTGCCAAAGCTATTGTTTTTGATCTATTTGGTGCCGGAATTGAAACATCATCTGGAGTGATAGAATGGGCGATTTCAGAGCTAGTGAAGAATCCAAGAACAATGGCAAGAGCTCAAGAAGAAGTTAGAACAGTATTTGGAGTCAATGGATACACCAATGAATCATCATCATCATGTGCTCTTGAGAAGCTAACATATATAAAAGCGGTTATCAAAGAAACAATGAGATTACACCCTCCATTTCCATTACTCCTTCCAAGAGAATGCAGAGAGACATGTGAGATCAACGGATACACCATAGCCGGAGGAACACAAGTGATAGTGAATGCATGGGCAATTGGAAGAGATCCTAAGCATTGGGGAGGCGAAGAAGACGCCGAGGTTTTCCGTCCGGAAAGGTTTCTAGAACATTCGATTGATTACAAAGGTTCCAATGTTGAGTTCATACCTTTTGGTGCTGGTAGGAGGATATGTCCAGGGATTAATTTCTCTGCTTCGAATGTTGAACTGTGTGTTGCGCAACTTCTGTATCATTTCGATTGGAAAGTTCCAGAAAATGGAGAGATTGATATGACTGAATATTTTGGGAGCACTGCAAGAAGGAAGAATGATCTTATCTTAGTTCCAATTCCATGGAATAAATAA 1311 0.3844 MHLKLGETSVMVVSSPEVAKEVFKKYDVNFFERPKHLGADILTYGSTNIATARYGGYWKQVKKIATMELLSPKRVFSFKSIRKEEVMNLITWISANNKFCVNLSEKVASLTSVITARAIFGEKCKDQEEFILLLKKLGNIVERVFVVFSLFPSHTWLHFISGAKCETEKVHKEFDVIIENIIKEKVKRMKNGGDESKTEDLLSILLNIVEDHGAYEYPVTINSAKAIVFDLFGAGIETSSGVIEWAISELVKNPRTMARAQEEVRTVFGVNGYTNESSSSCALEKLTYIKAVIKETMRLHPPFPLLLPRECRETCEINGYTIAGGTQVIVNAWAIGRDPKHWGGEEDAEVFRPERFLEHSIDYKGSNVEFIPFGAGRRICPGINFSASNVELCVAQLLYHFDWKVPENGEIDMTEYFGSTARRKNDLILVPIPWNK 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc242706g00001 436 PRINTS P450 superfamily signature 291 302 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc242706g00001 436 PRINTS P450 superfamily signature 371 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc242706g00001 436 PRINTS P450 superfamily signature 234 251 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc242706g00001 436 PRINTS E-class P450 group I signature 223 240 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc242706g00001 436 PRINTS E-class P450 group I signature 18 39 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc242706g00001 436 PRINTS E-class P450 group I signature 243 269 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc242706g00001 436 PRINTS E-class P450 group I signature 370 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc242706g00001 436 PRINTS E-class P450 group I signature 290 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc242706g00001 436 PRINTS E-class P450 group I signature 380 403 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc242706g00001 436 PANTHER OS08G0105600 PROTEIN 1 434 - -
Stsc242706g00001 436 Pfam Cytochrome P450 2 416 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc242706g00001 436 CDD CYP71-like 1 427 - -
Stsc242706g00001 436 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 373 382 IPR017972 GO:0005506|GO:0016705
Stsc242706g00001 436 Gene3D Cytochrome P450 1 430 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc242706g00001 436 FunFam Cytochrome P450 99A2 1 432 - -
Stsc242706g00001 436 SUPERFAMILY Cytochrome P450 2 433 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc242706g00001 Stsc-Chr242706 2000 3793 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc242706g00001 1 421 Cytochrome P450 AT3G48310 38.480 7.09e-102 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc242706g00001 - K23807 gmx:100779851 526.939