Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc242684g00001 ATGACATTTGTAACATGTGAAGAAGCCAATTATTTCTACAAGGAGTATGCTAAACGAGCTGGATTTGCTACCAAAATTAGAAATTCACAGAGGAATAAAGACACTGATGCAATCAAGAATCAACTCTTCACATGTAATAGGGAGGGGAAAAGGAAATCTGATATACCTGAAGTTGAGAAGACCAATCCGATGTCTCCGCTATTGTTCTTGCTGTTTTGA 219 0.3744 MTFVTCEEANYFYKEYAKRAGFATKIRNSQRNKDTDAIKNQLFTCNREGKRKSDIPEVEKTNPMSPLLFLLF 72
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc242684g00001 72 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 1 61 - -
Stsc242684g00001 72 Pfam FAR1 DNA-binding domain 12 60 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc242684g00001 Stsc-Chr242684 825 1172 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc242684g00001 FAR1 1.9e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc242684g00001 - - ahf:112762851 77.4109