Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc242665g00004 ATGGATGTGAGAAAGGGGGAAGAGTATGATGACGACAAAATCTATCGCCACAAAGAACTTTCCCGCAAAAGTCTTCTTCCAAGCGATGCACTCTATCAGTACATACTTAAGACAAGCGTATACCCAAGACAGCATGAAAGCGTCAAGGAGCTTCGCCACATGACGGAGAATCTACCCTGCCACCGCATGGCTACGCCAGCAGACGAGGGACCACTGCTAAGCATGCTAGTTAAGCAGATGAATGCAAAGAACGCCATGGAAATAGGTGTGCTCACTGGTTGCTCCCTTCTTGCCACTGCCCTTGCTCTCCCCCTACGATGGAAAGGTCCTTAA 333 0.4955 MDVRKGEEYDDDKIYRHKELSRKSLLPSDALYQYILKTSVYPRQHESVKELRHMTENLPCHRMATPADEGPLLSMLVKQMNAKNAMEIGVLTGCSLLATALALPLRWKGP 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc242665g00004 110 Pfam O-methyltransferase 38 104 IPR002935 GO:0008171
Stsc242665g00004 110 PANTHER O-METHYLTRANSFERASE-RELATED 21 104 - -
Stsc242665g00004 110 Gene3D Vaccinia Virus protein VP39 13 108 IPR029063 -
Stsc242665g00004 110 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 24 110 IPR002935 GO:0008171
Stsc242665g00004 110 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 28 104 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc242665g00004 Stsc-Chr242665 13330 16011 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc242665g00004 5 104 Monolignol Biosynthesis Gene Families AT4G34050 62.000 6.97e-35 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc242665g00004 K00588 - gmx:100799303 132.109