Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc242665g00001 ATGCTATATTGGTGCGCACAGCCTTGTCAGGGCCGCGGTCCGAAATTTAGAAGTGTCACAGAGATGCAACCAAGTTTGAAATTACCGAGTACTGGATTTGGGTCGTTCTCCCTAGGAAGCAGAAACAGAGGCTCTGGATTTGGCCTTCAAGCTTTTCTTTGCGATCTTCTCGTTCCTCGCGCTTTCTTTAGCCACTTCCGCTTTGAACTTTATCCGTTAAAGCTTGAAACACTTGAACGCACACATCAAGACATCGACAAGAACAAGGGGAAGTTTGATTTTGTTTTCGTGGATGCTGACAAAGACAATTACTTGAACTATCATAAGAGGTTGATTGAACTCGTGAGAGTTGGAGGCTTAATTGCCTACGACAACACCCTATGGAGTGGGTCTGTGGTGGCCCCACCTGATGCACCTATGGGAATAACAGTTAAGACATACCGGAGTTTTGTGATTGAATTCAATGAAATGATTGCCGCTGATTCAAGGGTTGAGATTTGCCAACTTTCCGTTGGAGATGGAATTACTTTGTGCCGCCGTATCATCTGA 549 0.4499 MLYWCAQPCQGRGPKFRSVTEMQPSLKLPSTGFGSFSLGSRNRGSGFGLQAFLCDLLVPRAFFSHFRFELYPLKLETLERTHQDIDKNKGKFDFVFVDADKDNYLNYHKRLIELVRVGGLIAYDNTLWSGSVVAPPDAPMGITVKTYRSFVIEFNEMIAADSRVEICQLSVGDGITLCRRII 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc242665g00001 182 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 49 180 IPR029063 -
Stsc242665g00001 182 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 1 181 IPR002935 GO:0008171
Stsc242665g00001 182 PANTHER O-METHYLTRANSFERASE-RELATED 75 181 - -
Stsc242665g00001 182 Pfam O-methyltransferase 76 181 IPR002935 GO:0008171
Stsc242665g00001 182 Gene3D Vaccinia Virus protein VP39 70 182 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc242665g00001 Stsc-Chr242665 1206 3088 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc242665g00001 86 181 Monolignol Biosynthesis Gene Families AT4G34050 70.833 1.40e-48 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc242665g00001 K00588 - mus:103989957 160.229