Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc242655g00001 ATGTTTGCAATTTGGTGTGTTCTTGTGTTGTCACTTCGGTACTCTCCTCTCCTTCTTCTTCTACTACTTCTTCTTCTTCTTCCTCCTTTGGCAGCTGCCATGTGTGGAATCCTTGCAGTGCTGGGTTGTGTTGACAACTCTCAGGCAAAGCGCTCTCGCATCATCGAGTTATCTCGAAGATTGAAGCATAGAGGACCTGATTGGAGTGGGTTGCATTGCCATGGAGATTGTTATCTTGCTCATCAAAGGCTTGCCATCGTTGACCCCACTTCAGGGGATCAACCTCTTTATAACGAAGACAAGACTGTTATTGTCACAGTAAATGGGGAGATATATAACCATAAGGAACTGAGAGAGAAACTGAGTTCCCACCAGTTCCGAACTGGAAGCGACTGTGAAGTCATTGCTCATCTTTATGAAGAGTATGGAGAAGAATTTGTTGATATGCTGGATGGGATGTTCTCCTTTGTCCTTCTTGACACGAGAGATAAAAGCTTCATTGCTGCTCGTGACGCTATTGGCATTACCCCTCTTTACTTGGGGTGGGGCCTTGACGGATCGACATGGTTTGCATCTGAAATGAAAGCTTTGAGTGATGATTGTGAGAGATTCATATCTTTTCCTCCAGGGCATATATATTCCAGCAAACAGGG 653 0.4472 MFAIWCVLVLSLRYSPLLLLLLLLLLLPPLAAAMCGILAVLGCVDNSQAKRSRIIELSRRLKHRGPDWSGLHCHGDCYLAHQRLAIVDPTSGDQPLYNEDKTVIVTVNGEIYNHKELREKLSSHQFRTGSDCEVIAHLYEEYGEEFVDMLDGMFSFVLLDTRDKSFIAARDAIGITPLYLGWGLDGSTWFASEMKALSDDCERFISFPPGHIYSSKQG 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc242655g00001 218 CDD AsnB 35 218 IPR033738 -
Stsc242655g00001 218 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 35 218 IPR017932 -
Stsc242655g00001 218 FunFam Asparagine synthetase [glutamine-hydrolyzing] 35 218 - -
Stsc242655g00001 218 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 35 218 IPR029055 -
Stsc242655g00001 218 PANTHER ASPARAGINE SYNTHETASE 34 218 - -
Stsc242655g00001 218 Pfam Glutamine amidotransferase domain 81 198 IPR017932 -
Stsc242655g00001 218 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 33 216 IPR029055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc242655g00001 Stsc-Chr242655 3 3343 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc242655g00001 35 197 PRT Gene Family AT4G34740 28.230 6.41e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc242655g00001 K01953 - rvl:131302475 370.933