Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc242646g00003 ATGGTATGCATAAGGAAGGCAACGGTGGATGACCTGCTGGCTATGCAGGCATGCAACCTCTTCTGCCTGCCAGAGAATTACCAGATGAAATACTACCTCTATCACATCCTCTCATGGCCTCAGCTTCTCTACGTCGCTGAGGATTACAATGGCCGCATCGTCGGCTATGTTCTTGCCAAGATGGAAGAGGAGACTTCCGAGTGCCACGGCCACATCACCTCCCTCGCCGTCCTCCGCACCCACCGCAAGCTTGGTCTTGCCACCAAGCTCATGACGGCTGCTCAGAACGCCATGGAACAGGTGTTTGGTGCTGAGTATGTCTCGCTACATGTCAGAAAGAGCAATCGTGCTGCATTTAATTTGTACACAGAGACATTGGGTTACAAGATTCATGACGTGGAGGCAAAGTATTATGCAGATGGGGAGGACGCTTATGACATGAGGAAGCAGCTCAAGGGGAAGCAGACACATCCACATCAGCATCAGCATCATCATAGTGGGGGTCATCATCATCACCACCACCACCATCACCATCATCACCATGGTGGTGGCTGTTGTTCTAGTGAAGCAAAAGCAGAGAAGACAGAGACCAGAAATGTGAAGGCCACCTGA 612 0.5114 MVCIRKATVDDLLAMQACNLFCLPENYQMKYYLYHILSWPQLLYVAEDYNGRIVGYVLAKMEEETSECHGHITSLAVLRTHRKLGLATKLMTAAQNAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDVEAKYYADGEDAYDMRKQLKGKQTHPHQHQHHHSGGHHHHHHHHHHHHHGGGCCSSEAKAEKTETRNVKAT 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc242646g00003 203 CDD NAT_SF 43 110 - -
Stsc242646g00003 203 PANTHER N-TERMINAL ACETYLTRANSFERASE 1 180 IPR045047 GO:0004596|GO:0006474|GO:0031415
Stsc242646g00003 203 MobiDBLite consensus disorder prediction 183 203 - -
Stsc242646g00003 203 Pfam Acetyltransferase (GNAT) family 39 128 IPR000182 GO:0016747
Stsc242646g00003 203 Gene3D - 2 193 - -
Stsc242646g00003 203 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 2 152 IPR000182 GO:0016747
Stsc242646g00003 203 MobiDBLite consensus disorder prediction 154 182 - -
Stsc242646g00003 203 MobiDBLite consensus disorder prediction 151 203 - -
Stsc242646g00003 203 FunFam N-alpha-acetyltransferase daf-31-like 2 185 - -
Stsc242646g00003 203 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 1 151 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc242646g00003 Stsc-Chr242646 17495 20468 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Stsc242646g00003 Acetyltransf_1 2.4e-16 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc242646g00003 K20791 - qsa:O6P43_029596 332.028