Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc242639g00003 ATGGGTGGTGGAGTGTTGGCAATGAGTGGTGGCAGCCAGGGTGGGTGCTACATTGTGTATTTGGGAGCACATTCTCATGGCCCAACCCCTACCTCTTTTGACATGGAAGTCGCAACATCTTCTCATTATGATTTGCTAACTTCTGTTCTGGGAAGTCAGGAGAAAGCGGAAAAAGCAATGATATACTCCTACAATAAGCACATCAATGGCTTTGCCGCTTTACTTGAAGACGAAGAAGCAGCTCAAATCGCAAAAAAGCAGAACGTGGTGTCGGTGTTCTTGAGCAAGGAGCACAAACTTCAAACAACAAGGTCGTGGGAATTTCTTGGACTACGAAGAAATGCTAAGAACACGGCGTGGCAAAAGGGTAGATATGGTGAAAATACAATCATCGCCAGCATTGACACAGGGGTTTGGCCGGAGTCGAAAAGCTTCCGGGACACAGGATATGGCCCCATCCCTTCCAAATGGCGCGGCGGTAATGTCTGTCAACTAGACAGACTTCCTACTTCCGCCAAAAATCTTTGCAACAGGAAGCTTATTGGAGCAAGATTTTTCAGCGAAATTTTTGAGGCAACTAACGGAAGAATAAATCCAAAAGAGCGTACAGCGCGTGACTTACAGGGTCATGGGACCCACACTCTATCAACCGCCGGGGGTGGTTTTGTGGAGGGAGCACATGTATTTGCAGTTGGTAACGGCACGGCAAAGGGTGGGTCCCCCAAGGCCAGGGTTGTAGCCTACAAAGTTTGTTGGTCAAGAACAAACGAGAACAGTTGCCACGACGGCGATATATTGAGGGCAATTGACCAAGCCATCAACGACGATGTTGATATCATCAATCTCTCTGTTGGTGGGCGACAGAGTGTAACCGAACGAGATATATTCAGCGATGGGGTGTCCATAGGGACTTTCCATGCAATTTCTAACAATATTCTTTGCGTTGCATCTGCTGGCAATGATGGACCTGATCCCGGCACTGTTGTGCATGGGGCGCCTTGGATATTCACTATTGGTGCTAGCACCATTGACAGGGACTTCACCAGTACCATTACTTACAGTGACGGCCGCAAAATCAAAGGAGGCAGTCTTTCAATAACACTGCCACCTGACCAGGCCTTCGGTTTCATCCTGGCTACTGATGGTAAACTTGCCAATGCAACAATCGAAGATGCTCAACTTTGTAGGGCAGGAACACTTGACCCGGCAAAAGTGAAAGGGAAAGTTGTGAAGTGCGTTAGAGAAGGGAATATAAAATCAGTTGCTGAGAGTCTGGAAGCCAAATCCGCCGGCGCATTGGCAATGGCGTTGGAAAATCAAAAGAAACAAGGCAAAACACTTACCGATGAGGCTCATATGGTGCCCAGTGTGACTTGGCATGAGGGTGATAAACCCGACCCTCGTAATTTAGTTAGTAATCCCCCCCAACCACCTCCTAAAAGAGAAATCGACTCTATTTCTCCACATGAATGGCAGAATCCTAACTATGACGTCATAGCTGCCACCGCTCCACCGAGCCCGTCTCTTACAGTAAAGCTATCCCCCGCAAAAACAGTGATTGGAAAGAAGGCAGCTCCAGTTATGGCTTCCTACTCATCTAGAGGACCCAATAAGATTCAGCCATCCATACTCAAGCCTGATGTGATTGCACCTGGAGTGAACATACTTGCTGCCTATTCACTAGGCACAAGTCCCTCTACCCTCCTTCAAGATACTCGCCGCTTTGAATTCAATGTGTTGCAAGGAACTTCTATGTCTTCTCCTCACGTTTCTGGCATTGCTGGACTTCTTAAAACTCTTCATCCTACTTGGAGTCCCGCTGCTATTAAATCAGCAATCATGACTACTGCAACCACAAGGGACAACACAAACAGGCCAATTCAAGATGCATTTGATAATGATTTAGCAAACTCTTTTGATTATGGGTCAGGACATGTTCAACCTTACCTTGCAATAGAGCCAGGACTCGTTTATGATCTTCACCTTATTGATTACCTCAACTTTCTGTGTGCCTCCGGATACAGTCAATACATCTCAATACTTAATAACAATAGGACTTTCGATTGTAAGGGGACTCATAGCGTAAATGACCTGAACTACCCTTCTATTACATTGCCACATCTTGGGTTGGATCCGGTCACGGTTAGTCGTACACTTACAAATGTAGGCCCTCCTGGAACATACAATGTAACTGCCAAATTGGATGGGTCCAAAGTTACCGTTGTGCCCAATTCCTTGACTTTCACCAAGTTGTATGAAAAGAAGACATTTAAGGTGATTGTGCAGGCATCAAGTGTGATTCAGCGTTTCAAATATCAATTTGGTGAATTGGTATGGTCAGATGGAAAGCATAGGGTTAGGAGTCCTATTACTGTTCGGCGCCAGTGA 2388 0.4619 MGGGVLAMSGGSQGGCYIVYLGAHSHGPTPTSFDMEVATSSHYDLLTSVLGSQEKAEKAMIYSYNKHINGFAALLEDEEAAQIAKKQNVVSVFLSKEHKLQTTRSWEFLGLRRNAKNTAWQKGRYGENTIIASIDTGVWPESKSFRDTGYGPIPSKWRGGNVCQLDRLPTSAKNLCNRKLIGARFFSEIFEATNGRINPKERTARDLQGHGTHTLSTAGGGFVEGAHVFAVGNGTAKGGSPKARVVAYKVCWSRTNENSCHDGDILRAIDQAINDDVDIINLSVGGRQSVTERDIFSDGVSIGTFHAISNNILCVASAGNDGPDPGTVVHGAPWIFTIGASTIDRDFTSTITYSDGRKIKGGSLSITLPPDQAFGFILATDGKLANATIEDAQLCRAGTLDPAKVKGKVVKCVREGNIKSVAESLEAKSAGALAMALENQKKQGKTLTDEAHMVPSVTWHEGDKPDPRNLVSNPPQPPPKREIDSISPHEWQNPNYDVIAATAPPSPSLTVKLSPAKTVIGKKAAPVMASYSSRGPNKIQPSILKPDVIAPGVNILAAYSLGTSPSTLLQDTRRFEFNVLQGTSMSSPHVSGIAGLLKTLHPTWSPAAIKSAIMTTATTRDNTNRPIQDAFDNDLANSFDYGSGHVQPYLAIEPGLVYDLHLIDYLNFLCASGYSQYISILNNNRTFDCKGTHSVNDLNYPSITLPHLGLDPVTVSRTLTNVGPPGTYNVTAKLDGSKVTVVPNSLTFTKLYEKKTFKVIVQASSVIQRFKYQFGELVWSDGKHRVRSPITVRRQ 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc242639g00003 795 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 17 792 IPR045051 -
Stsc242639g00003 795 PRINTS Subtilisin serine protease family (S8) signature 581 597 IPR015500 -
Stsc242639g00003 795 PRINTS Subtilisin serine protease family (S8) signature 126 145 IPR015500 -
Stsc242639g00003 795 PRINTS Subtilisin serine protease family (S8) signature 206 219 IPR015500 -
Stsc242639g00003 795 FunFam Subtilisin-like protease SBT1.5 128 383 - -
Stsc242639g00003 795 ProSiteProfiles Serine proteases, subtilase domain profile. 105 652 - -
Stsc242639g00003 795 Pfam Peptidase inhibitor I9 17 100 IPR010259 -
Stsc242639g00003 795 SUPERFAMILY Subtilisin-like 100 656 IPR036852 GO:0004252|GO:0006508
Stsc242639g00003 795 ProSitePatterns Serine proteases, subtilase family, serine active site. 582 592 IPR023828 -
Stsc242639g00003 795 Gene3D - 669 794 - -
Stsc242639g00003 795 Pfam Fibronectin type-III domain 697 792 IPR041469 -
Stsc242639g00003 795 CDD PA_subtilisin_like 350 457 - -
Stsc242639g00003 795 FunFam Subtilisin-like protease SBT5.3 8 101 - -
Stsc242639g00003 795 Pfam Subtilase family 126 622 IPR000209 GO:0006508|GO:0008236
Stsc242639g00003 795 CDD Peptidases_S8_3 98 618 IPR034197 -
Stsc242639g00003 795 MobiDBLite consensus disorder prediction 457 483 - -
Stsc242639g00003 795 Gene3D - 344 520 - -
Stsc242639g00003 795 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 6 101 IPR037045 -
Stsc242639g00003 795 Gene3D Peptidase S8/S53 domain 129 665 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc242639g00003 Stsc-Chr242639 7641 15781 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc242639g00003 17 793 Subtilisin-like Serine Gene Family AT2G04160 48.724 0.0 698
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc242639g00003 - - aip:107635251 1291.56