Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc242575g00002 ATGGCATCATCACATGGGAATTTGTCATTTATTGTAAGTGCTTTGGTGTTTGCAATTGTAGCAAGCAATGGTTTGTCAGAACTAACAGCAGATTACTATGAGAATTCATGCCCAAATGCATTGAGTACCATCAAAAGTGTTGTGGAGGCTGCCGTACAGAAAGAACGTCGTATGGGTGCTTCTTTGCTTCGCTTGCACTTCCATGATTGCTTTGTTAATGGTTGTGATGGTTCAATTCTTCTGGATTCCACAGCCACAATTGAGAGTGAAAAGAGTGCAAGGCCTAATAACAACTCAGCTCGAGGATTTGAAGTGGTAGATGAAATCAAGCAGGCAGTGGATCAAGCTTGTGGGAAGCCAGTTGTTTCTTGTGCAGACATTTTAGCTGTTGCTGCCAGAGATTCTGTAGTTGCCTTAGGAGGTCCGACATGGGATGTAAGACTAGGAAGAAGAGACTCCACCACAGCAAACCCTAACGGCGCGAACACAAACCTACCGGCGCCATCTCTGAACCTCACCCAACTGATCAAGAGCTTCCAAGATCAAGGCCTAGATGAGAAGGACCTAGTGGTTCTGTATGGAGCACACAGCATAGGTTTTGCACGTTGTGTTGCATATAGGGCCCATATTTACAATGACACAAACATTGATCCCAATTTTGCAAATTCCCTTAAGTACATTTGCCCTAGGGATGTTGGAGTTGGTGATGGTAATCTTGCTCCTTTGGATTGCACGGCTACAAAGTTTGATTCTCAATATTATAGTGATTTGATTAGCAAGAAGGGTCTTCTTCATTCTGATCAAGAGTTCTTCAATGGTGGCTCCACGGATCAATTGGTTAAGGAATATAGCTATAATTCCGAAGCTTTCTTTCGAGACTTTGGGAATTCTATGATTAAGATGGGAAATATTCAGCCACTAACTGGGGAACAAGGTGAAATTCGTGCTAATTGCAGAAAAGTCAATAATTAA 972 0.4249 MASSHGNLSFIVSALVFAIVASNGLSELTADYYENSCPNALSTIKSVVEAAVQKERRMGASLLRLHFHDCFVNGCDGSILLDSTATIESEKSARPNNNSARGFEVVDEIKQAVDQACGKPVVSCADILAVAARDSVVALGGPTWDVRLGRRDSTTANPNGANTNLPAPSLNLTQLIKSFQDQGLDEKDLVVLYGAHSIGFARCVAYRAHIYNDTNIDPNFANSLKYICPRDVGVGDGNLAPLDCTATKFDSQYYSDLISKKGLLHSDQEFFNGGSTDQLVKEYSYNSEAFFRDFGNSMIKMGNIQPLTGEQGEIRANCRKVNN 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc242575g00002 323 SUPERFAMILY Heme-dependent peroxidases 28 322 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc242575g00002 323 FunFam Peroxidase 166 301 - -
Stsc242575g00002 323 ProSiteProfiles Plant heme peroxidase family profile. 27 322 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc242575g00002 323 Pfam Peroxidase 45 284 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc242575g00002 323 CDD secretory_peroxidase 27 321 IPR033905 GO:0004601|GO:0042744
Stsc242575g00002 323 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Stsc242575g00002 323 PRINTS Plant peroxidase signature 256 273 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc242575g00002 323 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc242575g00002 323 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc242575g00002 323 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc242575g00002 323 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc242575g00002 323 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc242575g00002 323 PRINTS Plant peroxidase signature 296 309 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc242575g00002 323 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc242575g00002 323 PRINTS Plant peroxidase signature 240 255 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc242575g00002 323 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc242575g00002 323 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc242575g00002 323 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc242575g00002 323 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc242575g00002 323 PRINTS Haem peroxidase superfamily signature 242 257 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc242575g00002 323 Gene3D - 31 319 - -
Stsc242575g00002 323 PANTHER PEROXIDASE 72-RELATED 27 321 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc242575g00002 323 FunFam Peroxidase 31 174 - -
Stsc242575g00002 323 Gene3D Peroxidase, domain 2 166 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc242575g00002 Stsc-Chr242575 9172 11180 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc242575g00002 26 322 Peroxidase AT5G05340 59.060 6.13e-131 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc242575g00002 K00430 - gmx:100802035 473.396