Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc242526g00001 ATGAATAACCAGTTAACTGGTTGCATCCCTGAAGGAGTGGGGCTATTCACTGAGATGCAAGTTTTGGATGTTAGCTACAACACTCTCATGGGTCATGTGCCAGACACATTATCTTGTCTGCAAGACATTCAAGTCCTTAACTTGGCACATAACAAGCTTTCTGGGGAGTTATCAGATGTAATATGTTCTCTGAGAAGCCTTGCAAATTTGACTGTTGCTTACAATTTCTTTTCTGGGTTCAGCCAACAATGTTCAAGGCTTTTCTTCAGGAATGTGGGTTTTGATTTCTCACTTAACTGCATTCCTGGAAGGGACATGCAGAGACCTCAACCTGAGTGTTCTGTGATCCCAGGTGGTAGTCTAAGTTGTCTCAGAATTCCAACACCAAAGCCTCTAGTTTGCGGTTCTCTGGCTGTAAGTGCTTCTAAGCACACTAATTCTACTTCATCATCTCCTTGA 459 0.427 MNNQLTGCIPEGVGLFTEMQVLDVSYNTLMGHVPDTLSCLQDIQVLNLAHNKLSGELSDVICSLRSLANLTVAYNFFSGFSQQCSRLFFRNVGFDFSLNCIPGRDMQRPQPECSVIPGGSLSCLRIPTPKPLVCGSLAVSASKHTNSTSSSP 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc242526g00001 152 FunFam Leucine-rich repeat receptor protein kinase EMS1 1 83 - -
Stsc242526g00001 152 Gene3D Ribonuclease Inhibitor 1 108 IPR032675 -
Stsc242526g00001 152 SUPERFAMILY L domain-like 2 101 - -
Stsc242526g00001 152 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 1 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc242526g00001 Stsc-Chr242526 5527 5985 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc242526g00001 5 98 Leucine-rich Repeat extension Gene Families AT3G22800 35.000 1.72e-12 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc242526g00001 - - gmx:100775544 271.166