Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc242520g00002 ATGTCATCAGTTGCAAAATCTCTAGAAACGGACCATGATGATGATGAAGAAGAAGAAAGTTCTGCTGCGTTCAGCTGTGCTAGTTTTATGTCTAAGGGGTTCAAGAGAAACCAAGTGTTGGATTACAGCAGCGAGATAGCAGAAGAGGACGAAGATTATTACTATTCAGATGGATTTTTTGAGATCAAGCTCATGAAGGACGCTTTGGACACCATACAAGAAGCAGAAGAAGATGAGACAAGCACTGTGTTCTCTCTGGATTTTCACAAATGTGACGAGGAGGAGAAGGAAGAGAACTTGGTTTATGTGGCAGTTGGAGAGGGTGATTCAAGCATGGAAGTGCTATCATGGGCGTTGAAGAACTCCGTCACACCCTCCACCACCACCCTGTATCTGATACACGTTTTCCCTGTCATCAAGTTCATTCCAAGTCCACTTGGGAAAATTCCAAGGAGCCATGTAAAGTTAGAGTATGTTAACCACTACTTGACTCAAGAGAAAGACAAGAGGAAATTGCTGCTTAAGAAATTCATTGACCTGTGCATTCATTACAAGGTTAAGGTGGAGATGTTGCTGATAGAGGGCGACAAGGTTGCTGAAGCCATTGTGGACCTTGTTGGGAAACTTGATATAAGGAAACTGGTAATTGGGACAAACACATCTTATTTAAGAAAATCAAGGAGTGGTGGCATAGCGGACAAGGTACTCAAGAATGCACAGGAAACCTGTGATGTTAAAATCATATGCCAAGGAAGGGAAGTGATGGACAAAATGATTATGAGCAACTCAAACTCATCACGCTCCACAGACAGCACCACCAACTCACAGTCACAGTCACAGGATCAAGATGAACCCCGCAGCAGCATTGTGCCAAATCCTATTCCTACTTGGTTCTTTAGGACTCGATTTTTGTCACCCCAATGA 924 0.4318 MSSVAKSLETDHDDDEEEESSAAFSCASFMSKGFKRNQVLDYSSEIAEEDEDYYYSDGFFEIKLMKDALDTIQEAEEDETSTVFSLDFHKCDEEEKEENLVYVAVGEGDSSMEVLSWALKNSVTPSTTTLYLIHVFPVIKFIPSPLGKIPRSHVKLEYVNHYLTQEKDKRKLLLKKFIDLCIHYKVKVEMLLIEGDKVAEAIVDLVGKLDIRKLVIGTNTSYLRKSRSGGIADKVLKNAQETCDVKIICQGREVMDKMIMSNSNSSRSTDSTTNSQSQSQDQDEPRSSIVPNPIPTWFFRTRFLSPQ 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc242520g00002 307 MobiDBLite consensus disorder prediction 1 21 - -
Stsc242520g00002 307 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 103 247 - -
Stsc242520g00002 307 MobiDBLite consensus disorder prediction 262 294 - -
Stsc242520g00002 307 Gene3D HUPs 93 259 IPR014729 -
Stsc242520g00002 307 Coils Coil 307 307 - -
Stsc242520g00002 307 Pfam Universal stress protein family 102 240 IPR006016 -
Stsc242520g00002 307 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 34 299 - -
Stsc242520g00002 307 MobiDBLite consensus disorder prediction 262 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc242520g00002 Stsc-Chr242520 4849 6163 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc242520g00002 101 252 U-box Gene Family AT4G25160 30.323 1.09e-15 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc242520g00002 - - tpra:123908796 260.381