Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc242520g00001 ATGGACTCAAAGACTAGCACTAAAGCTCCTCCAAAACACCATCACAAGACAGCTGTGATCCAAACCTTAGAAACAAAAGACACCAAGCCTTCTCCTTTGCAGGTTCCGAAGGCGGCCAAGCCTGAGCTGGCTGCTTCTGGAGATTTATTAAGGCCTGCACAAAACCCATCGAAGCAGACTACTGGGGAAACTTCTGAAGAGAAGAAGTTGGGAATTCCAACTAAAAAAGGGTCTGATTCCCCAAGTAAAAGATGTGGCTCTGGACCTTCTGGATCTGAACAGGCTGTTAATGAGACCAGAGGATCTCAGGAAAACCTTATCGAGCAAGAGAAAAAGTCGTCTGGATATGGAAGTGTGAAGAACAGTTCTGTTTCTGCCAAAATCAGTGATGGGACTAGTAGTATTGCAAAGACTAGTGGAAGTGCCAAGATCAGTGATCGAGCTGATCTTGCTGAGAGTGGTAAGAGCAGTATTTGCAGAGGAAGCACGAGTAGTGATGTAAGCGATGAGAGCAGCTGCAGCAGTTTTAGTAGCAGCATTAACAAGCCTCACAAAGCTAATGATTTGAGATGGGAAGCCATCCAAGCTGTTCGAGCTAGAGATGGGGTAATGGGTTTAGGTCACTTTAGGTTACTGAAGAGGTTGGGTTGTGGGGATATTGGCAGTGTATATCTCTCTGAATTGAGCGGAACCAAATGTTATTTTGCGATGAAGGTAATGGACAAGGCATCCCTGGCTAGTCGTAAAAAGTTGCTTCGTGCTCAGACAGAAAGAGAAATTCTTCAGTCACTGGACCACCCCTTCCTTCCAACTCTGTATACCCATTTTGAGACAGAGAAGTTCTCATGTTTGGTAATGGAATTCTGCCCTGGTGGAGATTTGCATACTCTTAGACAGAAGCAGCCAGGGAAGCATTTTCCTGAGCAGGCAGTAAAGTTTTATGTGGCAGAGGTTCTCCTGGCTTTGGAGTACCTACACATGCTTGGGATTGTCTACCGTGATCTTAAGCCAGAAAATCCTTCATGTGTTGCTCCTACTACATGTTTTTCACCCCGACTCTTTTCCAGCAAATCAAAGAAGGAAAAGAAACCCAAACCTGAAATTGGCAATCAAGTGAGCCCATTACCTGAGCTGATAGCAGAGCCCACAGATGCTCGGTCAATGTCATTTGTTGGAACCCATGAATACTTGGCACCTGAGATCATTAAGGGTGAGGGTCATGGAAGTGCAGTTGATTGGTGGACTTTTGGAATATTTTTATATGAGCTGTTGTTTGGGAAAACTCCATTCAAGGGATCTGGAAATCGAGCTACATTGTTTAATGTTGTAGGTCAGCCTTTGAGGTTTCCCGAAGCACCCATTGTGAGTTTCGCAGCAAGGGATCTAATAAGGGGGTTGCTTGTCAAGGAACCTCAGCATAGGTTGGCATATAAAAGAGGGGCTACTGAGATAAAGCAACATCCATTTTTTGAAGGCGTGAATTGGGCGTTGATCAGGTGTGCTACCCCGCCAGAGGTCCCCAAGGCAGTAGAGTATGAGAAGATTCCTTCCCCAGCTTCATCAACCAGTGAAAAGGCTGTTCACCACAAGACAATTCCTGATCATAAAGGTTCTGATAATTACCTTGAGTTTGATTTCTTTTAG 1644 0.4489 MDSKTSTKAPPKHHHKTAVIQTLETKDTKPSPLQVPKAAKPELAASGDLLRPAQNPSKQTTGETSEEKKLGIPTKKGSDSPSKRCGSGPSGSEQAVNETRGSQENLIEQEKKSSGYGSVKNSSVSAKISDGTSSIAKTSGSAKISDRADLAESGKSSICRGSTSSDVSDESSCSSFSSSINKPHKANDLRWEAIQAVRARDGVMGLGHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKHFPEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENPSCVAPTTCFSPRLFSSKSKKEKKPKPEIGNQVSPLPELIAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPEAPIVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPEVPKAVEYEKIPSPASSTSEKAVHHKTIPDHKGSDNYLEFDFF 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc242520g00001 547 FunFam Serine/threonine-protein kinase AGC1-7 383 508 - -
Stsc242520g00001 547 PANTHER FLIPPASE KINASE 1-RELATED 63 339 - -
Stsc242520g00001 547 SUPERFAMILY Protein kinase-like (PK-like) 207 532 IPR011009 -
Stsc242520g00001 547 MobiDBLite consensus disorder prediction 80 141 - -
Stsc242520g00001 547 CDD STKc_phototropin_like 208 508 - -
Stsc242520g00001 547 Gene3D Phosphorylase Kinase; domain 1 208 509 - -
Stsc242520g00001 547 Gene3D Transferase(Phosphotransferase) domain 1 293 508 - -
Stsc242520g00001 547 MobiDBLite consensus disorder prediction 156 183 - -
Stsc242520g00001 547 SMART serkin_6 209 490 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc242520g00001 547 FunFam Serine/threonine-protein kinase D6PK-like 207 292 - -
Stsc242520g00001 547 ProSiteProfiles Protein kinase domain profile. 209 490 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc242520g00001 547 Pfam Protein kinase domain 210 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc242520g00001 547 Pfam Protein kinase domain 387 490 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc242520g00001 547 MobiDBLite consensus disorder prediction 1 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc242520g00001 Stsc-Chr242520 2255 4536 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc242520g00001 104 547 AGC Kinase Gene Family AT5G47750 74.850 0.0 741
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Stsc242520g00001 Pkinase 3.6e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc242520g00001 K08286 - gmx:100781600 866.3