Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc242514g00005 ATGAGGATGGAGGATACCTATTCTTACTTTCTTCTTGATGGCACACATATTCAAGTGATCAAGTTGAAAGTGGAAGAAGCTGTATTTATTGTGGCTGAGCTATTTGACAAGTTTCTCCATGGCTCAACCTTAGATGAATGCTATTCAGCTGTTGCTGCTGTTGGGCTTGATCTTCCTGATAACCAAGGAAAGGATATTACAGATAGTGAGTTGCTTGATTACATCTCAGAATCAAGTACCATGAACAAGTCATTAGCTGATTACAGTGAGCAGAAATCTTGTGCTATCACCACTGCTAAACGTCTTGCCGACTTTCTTGGTGATACAATGGTCAAAGATAAAGGTCTTCGATGTCAGTACATAGTAGCAAGTGAACCTAAGGGAACACCTGTAAGCGAGCGTGCTATTCCTGTTGCAATATTTGAAACAAAAGCTGGTAAAATCTCGTTTTATGATTAA 459 0.3943 MRMEDTYSYFLLDGTHIQVIKLKVEEAVFIVAELFDKFLHGSTLDECYSAVAAVGLDLPDNQGKDITDSELLDYISESSTMNKSLADYSEQKSCAITTAKRLADFLGDTMVKDKGLRCQYIVASEPKGTPVSERAIPVAIFETKAGKISFYD 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc242514g00005 152 Gene3D - 24 122 IPR042087 -
Stsc242514g00005 152 PANTHER DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A 32 146 IPR029703 GO:0003677|GO:0003887|GO:0006260|GO:0006281|GO:0008622
Stsc242514g00005 152 SUPERFAMILY DNA/RNA polymerases 30 145 IPR043502 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc242514g00005 Stsc-Chr242514 18780 20302 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc242514g00005 3 151 Core DNA Replication Machinery Family AT1G08260 69.620 2.58e-62 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc242514g00005 K02324 - gmx:100812003 207.223