Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc242514g00004 ATGAGGATGGAGGATACCTATTCTTACTTTCTTCTTGATGGCACACATATTCAAGTGATCAAGTTGAAAGTGGAAGAAGCTGTATTTATTGTGGCTGAGCTATTTGACAAGTTTCTCCATGGCTCAACCTTAGATGAATGCTATTCAGCTGTTGCTGCTGTTGGGCTTGATCTTCCTGATAACCAAGGAAAGGATATTACAGATAGTGAGTTGCTTGATTACATCTCAGAATCAAGTACCATGAACAAGTCATTAGCTGATTACAGTGAGCAGAAATCTTGTGCTATCACCACTGCTAAACGTCTTGCCGACTTTCTTGGTGATACAATGGTCAAAGATAAAGGTCTTCGATGTCAGTACATAGTAGCAAGTGAACCTAAGGTGCAATCCATATATAACATGGAAAATTCTTGA 414 0.3913 MRMEDTYSYFLLDGTHIQVIKLKVEEAVFIVAELFDKFLHGSTLDECYSAVAAVGLDLPDNQGKDITDSELLDYISESSTMNKSLADYSEQKSCAITTAKRLADFLGDTMVKDKGLRCQYIVASEPKVQSIYNMENS 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc242514g00004 137 PANTHER DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A 32 130 IPR029703 GO:0003677|GO:0003887|GO:0006260|GO:0006281|GO:0008622
Stsc242514g00004 137 Gene3D - 24 131 IPR042087 -
Stsc242514g00004 137 SUPERFAMILY DNA/RNA polymerases 30 125 IPR043502 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc242514g00004 Stsc-Chr242514 18780 20302 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc242514g00004 3 127 Core DNA Replication Machinery Family AT1G08260 70.896 9.32e-52 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc242514g00004 K02324 - gmx:100812003 172.17