Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc242512g00002 ATGTTGTTTCTCTTTGTAGCAATAATGATTGTATCAACCTTGCTATTCCTTTATTATGTTCATCGTCGTAGAAGAAATGATTGTAGAACCCCTCTCGGAACAGATTGGCCAATCCTTGGCATGTTACCACAAGTGCTTTGCAAGTTGTCCCAAATCCATGATTTTGCAACAACTATTTTGAGAGAAAAAGGTGGCACCGGTGAATTCATGGGACCATGGTTCACCAACTTGAACTATATGGTCACTAGTGACCCCATGAATGTCCATCACATGTTCAGCAAAAACTTTGACAACTATGTCAAGGGCCCTGAGTTTCAGGAGATGTTCAACCCTTTCGGAGATGGTCTTGTCACTAATGATTCAGAGACATGGAAATACCATAGGACCTTGCTCCATTCCTTGTTCCGGAAAAAGAGTTTTGAGACCATGTCGGAGAAAACCATTCAAGAGATGGTCCAACATAGCTTGCTTCCAATACTTGATCATGCATGTTTGCATGGGAAGGTTTTGGACCTTCAAGAAGTGTTTAGTCGATTAATGTTCGAAGAGACATGCCTCCTGCTTTTAGGACATGATCCTAATAATCTCTCAATTGAATTTCCATTGGCCGAAGTTGAGAAGGCTTTTGACGAAGTTCAGGAGACCATATTCTACAGGCACTATGTGCCAAGAAGTGTTTGGAAGTTTCAAGAATGGCTTCAAATTGGTGAGGAGAAGAAGTTGACAAAAGCATGCAAAATTTTTGACCAATTTCTATATTCATGCATTACAAGAAAGCGCCAAGAGTTAATAAGCAAACCCAACACAAGTGGTGACGATGTGCTAAGTGGTATCATGATGAGTGAAGAAAAGAGCAAAATGGTGCACGATGATAAATTTATAAGAGATGTTATATTCAATCTTTTTGCAGCCGGAAGAGATACGATAACTTCAGGTCTTGTATGGTTTTTTTGGCTTGTTGCAACACATCCATCAGTGGAGGCCAAGATTCTAGAAGAAATCGAAAAACAATTTGGGGCCACAGATGGGGAGAAATGCAAAAGTTTAGGAACAGAAGATGTAGAGAAGCTAATTTATCTACATGGTGCTCTGTGTGAAGGATTGAGGCTATTTCCACCTATTCCTATTGAACGAAAGCAACCATTGAAACATGATACTCTTCCTAGTGGTCATCGTGTTAATCCAAACACTACTATTTTATTGTTTACTTATGCTATGGGAAGGTTTGAAGAGATATGGGGAAAAGATTGCATGGAGTTTAAACCAGAAAGATGGATTTCAGAAAAAGGAGGAATAATACATGTTCCATCTTATAAGTTTATTAGTTTTAATGCAGGTCCTAGGACATGTCTGGGAAAAGATGTGTCTTTCTTTCAAATGAAAATAGTAGCAGCAGCTGTTTTGCGCAACTATCGTATACAAGTGGTGGAAAATCATCGTGTTATCCCAGTTCACTCGATTATACTTCTGATGAAGCATGGCCTCAAGGTTAACATATCAAGAAGATAG 1509 0.3917 MLFLFVAIMIVSTLLFLYYVHRRRRNDCRTPLGTDWPILGMLPQVLCKLSQIHDFATTILREKGGTGEFMGPWFTNLNYMVTSDPMNVHHMFSKNFDNYVKGPEFQEMFNPFGDGLVTNDSETWKYHRTLLHSLFRKKSFETMSEKTIQEMVQHSLLPILDHACLHGKVLDLQEVFSRLMFEETCLLLLGHDPNNLSIEFPLAEVEKAFDEVQETIFYRHYVPRSVWKFQEWLQIGEEKKLTKACKIFDQFLYSCITRKRQELISKPNTSGDDVLSGIMMSEEKSKMVHDDKFIRDVIFNLFAAGRDTITSGLVWFFWLVATHPSVEAKILEEIEKQFGATDGEKCKSLGTEDVEKLIYLHGALCEGLRLFPPIPIERKQPLKHDTLPSGHRVNPNTTILLFTYAMGRFEEIWGKDCMEFKPERWISEKGGIIHVPSYKFISFNAGPRTCLGKDVSFFQMKIVAAAVLRNYRIQVVENHRVIPVHSIILLMKHGLKVNISRR 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc242512g00002 502 SUPERFAMILY Cytochrome P450 18 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc242512g00002 502 CDD CYP86A 68 495 - -
Stsc242512g00002 502 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 443 452 IPR017972 GO:0005506|GO:0016705
Stsc242512g00002 502 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc242512g00002 502 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc242512g00002 502 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc242512g00002 502 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc242512g00002 502 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc242512g00002 502 PRINTS P450 superfamily signature 450 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc242512g00002 502 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc242512g00002 502 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc242512g00002 502 PANTHER CYTOCHROME P450 18 497 - -
Stsc242512g00002 502 Gene3D Cytochrome P450 18 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc242512g00002 502 Pfam Cytochrome P450 32 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc242512g00002 Stsc-Chr242512 11518 13026 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc242512g00002 3 502 Cytochrome P450 AT4G32170 44.664 2.75e-160 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc242512g00002 - - aprc:113867564 641.343