Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc242510g00001 ATGGGGTGTCTACTTGAATCAATTGCATCAGAATTCATCTCCAAACTTAGAGATTGGGTGGTGAAGCCTACTGTGATGCAGTTTCAATATTTGATCTGCCATGAAAAACTCGTAGGCAACCTAAAGAAGGAACACAAGAAGCTGGAGGACATGAAAAATGCAATACAAGGGAAAGTGCTTGCTGATAGAAGCAGTGGACTTCAAATTGCAGATAATGTACAACCGTGGCTCTCCGGTGTAGAAGCCATTGATGCCGAGGTTCAGAAACTCCTTGAAGATGCTGAACAAAACGAGCACAAGAAATGTTTTGGTGGACTGTGCCCAGATTTGGCTGAAAACTACTCATTGGGCAAGCAAGCGACCAGAAAATCACAACATATTGCAGGCTTGGTGGAGGGGAGGAGAGAACTTGGTCCCATATCTTATCCTAAACCTGTACCAAGGGTTGGGTCCACCTTCACTCAAGAAATCATGGGCTTCGAGTCAAGAAACAAGATCATTGGGGATGTTGTGGAGAAGCTGAAGGATGACAAGATCAAAAGGATGAGCATTTGTGGGATGGGCGGGGTGGGAAAAACCACCCTGGTCAAAGGAGTTATCAAAGTTGTTGAATCACAAAAGTTGTTCGATAAGGTTGTCATGGCCGTGGTTTCTCAAACCCCAAACTATGAGAAGATCCAAAATGAGATTGCTGGTTTTCTGGGGCTGCATTTCCAATCGATGGGTGAGCGAAGTAGAGCTGGCGAACTTGTTCAAAGATTGAAAGAAATTGAGAGAGTGCTAATAGTGTTGGACGATGTGTGGAAAGATGATCTTGATTTTGAGATGATTGGAATCCCTGTTTCTGGACTTGAGAAAATTTGCAAGATAGTGTTCACATCCCGAGACGAAGATATGTGTAGTAGGATGGGAAGCCAGAAGAATGTGGTAGTTCCCTTCCTATCTGAGGTGGAGGCTTGGGACTTGTTTCGAGACATGGCGGGGAGTGAGACTGTAGACAAGGCTAACATAAACTCCATCGCAAGAGAGGTTGCAAAAGAATGTGGAGGATTGCCTCTTGCCATTGTGACAGTTGCAGGTGTCATGCAAAACAAAGCTAAGCCTCAATGGCAGAATAGACTTGTGGAACTGAAGCATTCTCAGCTGCCTAATAAAATGCATTTAAGCATTGAGTTTAGCCTTGAATCTCTGCGAACTGAAGAACACAAATATTGCCTTTTTCTATGTGCCTTATTTCCCGAAGACTTTGATGTTCCGATCGAGAGTGTGTTGCGCCATGCTGTGGGAATGCAATTGATTGTTTTCACCGGTGCGTTGGTCAATGCAAGAAACAAGGTGGACACGTTGGTGGATGACCTCAAAAGGTGCTTCTTGTTGCTGGAAAGTGAAAAAGTTGGCTGTGTGAAGATGCACGATGTTGTGCGCGATGTTGTTCTATCAATTGCATCTCGAGAAGAGCATGGCTTTGTGGTGCAGCAAGGTTGTGATGAATTGAAGCAGTTGAAGAAACAAGACAAAGCAGTTCATTTCAGAGCATTGTCACTCATTTTGCAAGATGCAATCACCGATGGCAAGGAGTTTCAAAATGGCTTACGCTGTCCAATGCTTGAGCTCTTCCAAGCGCGATCTGAAATAGAGGAAGCAATTTTGTGGCCAGAGGATTTCTTGCAAGGAATGCGTAAGATCAGAGTTTTGACAATGAACAAATTGAACATCCCAGTCATGTTTTCTCTTTTCCAAACCTCTGTGAACTTAAGTACATTGCAATTGGAACATTGTGATGTTGGAGATGTGTCTGTGATTGGCATACTTGTGGCACTTGAAATCTTAAGCTTCTCGGGCTCTAACATTAAAGAACTTCCAGCTGAAATTGGGCAACTAAGCTCTCTTAAATTGCTGGACTTGACAGGATGTGAAGAGCTTGTTTTCATTTCAGATAATGTCTTTGCAGGATTGACTCAATTAGAAGAACTTTATTTCAGGGTGGAGAACTTTCCTTGGATGCTAAACGAGACAGTTCTTGGTGAGTTGAGAGAACTTTGTCAACACTTGAAGGTTTTTGAGATCCAAGTAAGAGAGGTAGAAATTCTGCCCAAAGATTTGGGTTTCAATAACCTAGAGAGGTTTTGGATTTATGTGGCTTCTTCATATAATCATTGGGAAGATGCTCGTGTTGGATATGTGGAGCCAAATACGTTAGTGTTGAGAGGTACAAGTTACAACAAGTGTATGAAGGGTAGTTCAGTAGTAATGCAATTGAAGAGATGTGAAGTTCTCAGGTTAGGAAGGGTGAAGGAGTTGAAAAATGTGATGAGCGAGTTAGATGATAGTGGATTCCAATGCTTGACATATCTAAAGCTTGATTCTTGTCCAGATGTTGAGTATGTAGTAGATCGGATGAGTGCCTTCCCGCTATTGAAGTCATTGTCAATTCAGTATCTCCCAAAGCTAAGGGAGATATGTAAGGCATCCCACAATGATAGCGAACTCAACAACTCATTCTCAAATTTAGAGGAACTGTATTTGTATTCTCTTCTAATATTCACTGGCTTCAGCAATGCCATGGATTCAAGTGAGGCGGCACCTTCATCATCTCATCATGGCTCAAGCGAAAGAGTTGAGGGTACTCAAAGTGTGGAAGAGGAGTCTATGTCTAAATCAAATTGTGATGCGAGTTGCCACAACAAGTTATTTTCATCATTTTGGATGCTGAAATTTCCAAGATTGGAATCCATCACCTTAATGAAGTGTCATTCCTTGGAGGAAGTATTTGACATGCAAGAATATTCAAAGTCCTCCAATTCCCAAATGTTTCCTCACCTGCGAGATATCACAATAGAATTTCTTCCTAAGCTCAAATATGTGTGGGGTAATGTTCCGCGCATTGTTGATGGGTTTCACAATTTGAAATCCATTGACATATTAGGATGTCACTCTTTAAGGCACGTGTTTACACCAGCCACTGTCAGAGCAATGGTCAATCTTGAGACGGTACAAATAAGATATTGCAAGTCAATGGTGGCTTTGGTACTTGATGAAGAAACCAGTGGAAGAGAACAAACAATTATCTTTAACAAATTATCTTCTTTATCACTCTCTCGTCTTCCGAATTTGGGAAACTTGTATACAGATTCTGCAAAGTTACAATGCCCATCATTGATAACATTCTCTTTTTATAAATGTCCCAAGTTGAAGGTATCTCTGATACCAACCCAATTGAAGATACAAAACAATGAGTGTAGGAATTCTAAAGAAAAAAAGTTATCAAGCTCATTTCATCGGCCCAATATTGGTTGCATGCCTTGGCCACTTAAATTTATTGGGCAACGTAGTCAAGACAACACTACAAGCATGGATGCATCAATGGCACAACATCAACAACTTGCAATTTCTGAAATTAAGGGCAAGGCAGAAACAAGCCATTTACCAGTTCTTGAACACCTTCATCTAGAAGACTGTGATTTAGTGGAAGAAGTAGTTTTGATTGAGGAAAGTCATGATTCCAGTCTTGACATTTGTGATAATGACAAGTTGGAAAAAAGAACAAGCATGATGGTTACTTTCTCTCAAATGGTATCACTTGAATTGATTAACCTACCAAATCTTGAGAATTTTTGTTCTTTTGCAATCAAGAAGCAACATGGCCGGGATTCTAATGAAGGCAGTGAGAGAATAAGAGGAAATCCTTTTATTAATGGGTTATTTGTTCCACACTTAACATCTCTAAATATGTCTGGGTGTGACAAGATAAAAACATTGTTCTCTTTTTCAACTTTTGAAAATCTTCATAGTTTAGAAGTAAGTGATTGCAAGAACATAGAAGAAATAGTGTCCAAAGAAAAGATTAACACAAGTGCAAATCAAGTCATGTTCCCAAAATTAGAGACTCTAAATCTTGAAAGCTTACCAATGTTGAAAGCCTTCTGTCAAGCTTCCTATGCCTTTGAGTTGCCATCTCTGCAAGATGTGACGATTAAAGATTGTCTGAATATGGAAGCATTTTCACGGGGATCTTGTCATACAAATATGCTCAAGAATATCACCATGAATTCAAAGGCGACATACTTCAAATGTGATATCTTTATGCAAAAAAGAGACCAGTTGAATGCCACTGTAGAGGGATTTAAAACATTTATGGCACTGCATGAAGAAAAGATGATTAGGTGGAGCCATCTCCATGATAAAGGCATATCCAAGAACTTGTTTGAAATCTCAGATATGAAGGAGATGCACATGTTTCCACATGTGAGGGAACTAAGCATAAAAGCTTGTGATTCACTACAAGAGGTGTTTGAATCAAGAGGAGGAGTGCTTACAAAAGAAGGATATGATCAAAATATAAATAATTATGAGTTACAGAGCATAGAATTAGAAGATTTACCAAAAGTAAGGAGCATATGGGGACCCAATATTATAAGGCATGCAAGTTTTGGCAAGTTAACTTCAATTGAAATTGCAGGATGCAACAATTTAAAATGTGTGGTACCCTATTCTGTTGCCAAAAGTCTTGTGGAGATAAAAGAACTAAAAGTCAAAAACTGTGAGATGATACAAGAGATAGTTAAAAAAGAAGAGGAAGAGAAAAACATCAACATGGACGGAGCCTGCAAAGATGAGACCTTATTTCCCAAATTGGAGAACTTGAGTCTTGAAGGTCTGCCGAATATGAGATGTGTCTGTTATGGAGATTATGGCTATGACATCCCATTGAGAAATGAAGATGAAGAAGATCAGAAGCAGCAACAGGTGCAGATCTCATTTCCACAGTTAAAAGAATTAAATTTAAGTGATGTGCCCAACCTCCAATGTTTCTGTGGAGGTTCATATGACTATGACACAATGCTTTTATTACCTTCCTCACAAATCAATGGAATGGGAAAAGTGATTGTAAGCACACCTAAGCTTCACAAGGTTAATAATGAGATGCTCACTCTTGGAGACGTTAATTTGACACTATATTATCTTCTTAGTTATTCAGATAAATATAAGGTGGAGTTGCAAGAAGTAGAGACATTTGAAGGCATTGATGAGAAACCTCAATACAAACACTTGGTGGCCTACATGAGCAGGGTAACAAGTCTTCAACTTGAGAATTGCAACAAGCTTCTCAAATGTGTCCCATCCAACACCATTCATTCTTTATTATTCCAACATCTCGAACAGCTTCATGTACAGCAATGTCAGATTATGGAAGTTGTATTTGAAGGGAATAGCACTGGGATTGATAAATCAGAATTAGAAAGGATGGAGTTGCGTTCTCTACCGAAACTGAAGCACATTTGGAGAAACAATAACTCTGTTATTAAAGGCTTTGAGAATCTGACATATCTAATAATTAGTGGGTGTCATGATTTGAAGTTTGTGTTTGCAGATGAGTCCGTAGCCAGAAGCCTTCCGAATCTGGAAGAACTTGAAGTGGATGAATGTGAAGAAATGGAAGAGATTATTGAAAACAATAACAATAATAAAATTGTGAAGCAAAAGGTGGCTAAGATTATATTCCCATCTCTTGGGAGTATTAAACTTAAAAAGTTATCAAAGCTAAAGTGGTTCTGTTCAATAAGCTCTGTCTGTTTCGAGCTACCACGTTGTAAATGTATAGAAATAAAAGAATGCCCAAAGATGGAGAGCTTCTGCCATGCACCCTTATACACACCATGGCTATCGACAATCAAGGTGGATGAGGCAGAGTGCGATCGCCATGAGGAAGTGAACGAAACGATACGACAACGACACCGTAAATTCTCATGA 5751 0.3958 MGCLLESIASEFISKLRDWVVKPTVMQFQYLICHEKLVGNLKKEHKKLEDMKNAIQGKVLADRSSGLQIADNVQPWLSGVEAIDAEVQKLLEDAEQNEHKKCFGGLCPDLAENYSLGKQATRKSQHIAGLVEGRRELGPISYPKPVPRVGSTFTQEIMGFESRNKIIGDVVEKLKDDKIKRMSICGMGGVGKTTLVKGVIKVVESQKLFDKVVMAVVSQTPNYEKIQNEIAGFLGLHFQSMGERSRAGELVQRLKEIERVLIVLDDVWKDDLDFEMIGIPVSGLEKICKIVFTSRDEDMCSRMGSQKNVVVPFLSEVEAWDLFRDMAGSETVDKANINSIAREVAKECGGLPLAIVTVAGVMQNKAKPQWQNRLVELKHSQLPNKMHLSIEFSLESLRTEEHKYCLFLCALFPEDFDVPIESVLRHAVGMQLIVFTGALVNARNKVDTLVDDLKRCFLLLESEKVGCVKMHDVVRDVVLSIASREEHGFVVQQGCDELKQLKKQDKAVHFRALSLILQDAITDGKEFQNGLRCPMLELFQARSEIEEAILWPEDFLQGMRKIRVLTMNKLNIPVMFSLFQTSVNLSTLQLEHCDVGDVSVIGILVALEILSFSGSNIKELPAEIGQLSSLKLLDLTGCEELVFISDNVFAGLTQLEELYFRVENFPWMLNETVLGELRELCQHLKVFEIQVREVEILPKDLGFNNLERFWIYVASSYNHWEDARVGYVEPNTLVLRGTSYNKCMKGSSVVMQLKRCEVLRLGRVKELKNVMSELDDSGFQCLTYLKLDSCPDVEYVVDRMSAFPLLKSLSIQYLPKLREICKASHNDSELNNSFSNLEELYLYSLLIFTGFSNAMDSSEAAPSSSHHGSSERVEGTQSVEEESMSKSNCDASCHNKLFSSFWMLKFPRLESITLMKCHSLEEVFDMQEYSKSSNSQMFPHLRDITIEFLPKLKYVWGNVPRIVDGFHNLKSIDILGCHSLRHVFTPATVRAMVNLETVQIRYCKSMVALVLDEETSGREQTIIFNKLSSLSLSRLPNLGNLYTDSAKLQCPSLITFSFYKCPKLKVSLIPTQLKIQNNECRNSKEKKLSSSFHRPNIGCMPWPLKFIGQRSQDNTTSMDASMAQHQQLAISEIKGKAETSHLPVLEHLHLEDCDLVEEVVLIEESHDSSLDICDNDKLEKRTSMMVTFSQMVSLELINLPNLENFCSFAIKKQHGRDSNEGSERIRGNPFINGLFVPHLTSLNMSGCDKIKTLFSFSTFENLHSLEVSDCKNIEEIVSKEKINTSANQVMFPKLETLNLESLPMLKAFCQASYAFELPSLQDVTIKDCLNMEAFSRGSCHTNMLKNITMNSKATYFKCDIFMQKRDQLNATVEGFKTFMALHEEKMIRWSHLHDKGISKNLFEISDMKEMHMFPHVRELSIKACDSLQEVFESRGGVLTKEGYDQNINNYELQSIELEDLPKVRSIWGPNIIRHASFGKLTSIEIAGCNNLKCVVPYSVAKSLVEIKELKVKNCEMIQEIVKKEEEEKNINMDGACKDETLFPKLENLSLEGLPNMRCVCYGDYGYDIPLRNEDEEDQKQQQVQISFPQLKELNLSDVPNLQCFCGGSYDYDTMLLLPSSQINGMGKVIVSTPKLHKVNNEMLTLGDVNLTLYYLLSYSDKYKVELQEVETFEGIDEKPQYKHLVAYMSRVTSLQLENCNKLLKCVPSNTIHSLLFQHLEQLHVQQCQIMEVVFEGNSTGIDKSELERMELRSLPKLKHIWRNNNSVIKGFENLTYLIISGCHDLKFVFADESVARSLPNLEELEVDECEEMEEIIENNNNNKIVKQKVAKIIFPSLGSIKLKKLSKLKWFCSISSVCFELPRCKCIEIKECPKMESFCHAPLYTPWLSTIKVDEAECDRHEEVNETIRQRHRKFS 1916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc242510g00001 1916 Gene3D Ribonuclease Inhibitor 537 857 IPR032675 -
Stsc242510g00001 1916 MobiDBLite consensus disorder prediction 859 881 - -
Stsc242510g00001 1916 Coils Coil 1440 1460 - -
Stsc242510g00001 1916 Gene3D Ribonuclease Inhibitor 1672 1897 IPR032675 -
Stsc242510g00001 1916 SUPERFAMILY L domain-like 469 1335 - -
Stsc242510g00001 1916 Coils Coil 80 100 - -
Stsc242510g00001 1916 SUPERFAMILY L domain-like 1438 1853 - -
Stsc242510g00001 1916 Coils Coil 34 58 - -
Stsc242510g00001 1916 Pfam NB-ARC domain 165 383 IPR002182 GO:0043531
Stsc242510g00001 1916 Gene3D Ribonuclease Inhibitor 892 1093 IPR032675 -
Stsc242510g00001 1916 Gene3D Ribonuclease Inhibitor 1388 1610 IPR032675 -
Stsc242510g00001 1916 Gene3D Ribonuclease Inhibitor 1222 1359 IPR032675 -
Stsc242510g00001 1916 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1121 1339 - -
Stsc242510g00001 1916 SUPERFAMILY L domain-like 553 844 - -
Stsc242510g00001 1916 FunFam Probable disease resistance protein At1g61300 141 308 - -
Stsc242510g00001 1916 PRINTS Disease resistance protein signature 254 268 - -
Stsc242510g00001 1916 PRINTS Disease resistance protein signature 348 362 - -
Stsc242510g00001 1916 PRINTS Disease resistance protein signature 625 641 - -
Stsc242510g00001 1916 PRINTS Disease resistance protein signature 181 196 - -
Stsc242510g00001 1916 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 409 IPR027417 -
Stsc242510g00001 1916 Gene3D - 313 397 IPR042197 -
Stsc242510g00001 1916 Gene3D - 149 311 IPR027417 -
Stsc242510g00001 1916 SUPERFAMILY L domain-like 891 1818 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc242510g00001 Stsc-Chr242510 4825 16469 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc242510g00001 179 485 WRKY Transcription Factor Family AT5G45050 26.498 3.58e-08 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc242510g00001 - - aip:107647161 2493.38