Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc242508g00002 ATGTTCCTATCATCATCATCAAGAAAATCCATAGCCATATCCATCACAATTATCCTCCTACTCCTCCTCAATCAAACAACAACAACATTGGTCTCATCAAAATGCACTTGTGATGACAATTCATCACAAGCTAGTAGTAACAACAACAACGTTTCTGAGGCACTAAAGTACAAATTAATAGCCATGGCAACAACACTAGTTGCTAGCATAATTGGTGTGTGCCTTCCAATCATGGCAAAGAACTACAGATACCTTAACCCAGAGAATGATTTGTACCTCTTGGTGAAATCATTTGCTGCTGGTGTGATCTTAGCAACAGGCTTCATCCACATTCTTCATGATGCATTTGAGAATCTAACAAGCCCTTGTATCAGTGAGAAGCCATGGGGGTTGTTCCCATTCTCTGGGTTTGTGGCAATGGTTGCAGCAATTGGGACACTCATCATGGAAGCTTTGGTTACTGGGTACCATAAAAGGTCTGAATTGATCAAAGCTCAGCCACTTGAAGATGAAGATGAAGGAGTTCATCATCATCATAATAATAATGGATTAGATTCACCGGATCATCTTCGGAATACTATAGTTTCTCAGATTTTGGAGTTAGCAATTGTTGCGCATTCAATCATTGTTGGGGTGTCTCTTGGGGTGTCCCAAAGTCCAAACACAATCAAGCCTCTGGTAACTGCATTGAGTTTTCATCAATGCTTTGAAGGCATGGGACTTGGTGCCTGCATTTCCCAGGCACAATTTAAATACCACACAGTTGTGATTATGGTACTATTCTTTTGCCTTACAATTCCAACTGGAATTGGGGTTGGTATTGGCATATCAAAAATCTACAATGAAGGAAGTCCAAAGGCTTTAATAGTTGAAGGGCTTCTGCTATCAGCATCGGCAGGGATTCTAATTTACATGGCACTTGTTGATCTTCTTGCCTCTGATTTCATGAACCCTAAAATGCTAAGGAGTCTGAGGCTCCAACTTTCTGCAATTCTTGCACTTCTTGTGGGAGTGACTTGTATGTCATTGTTGGTATTCTGGGAAGGAGCATAA 1053 0.4084 MFLSSSSRKSIAISITIILLLLLNQTTTTLVSSKCTCDDNSSQASSNNNNVSEALKYKLIAMATTLVASIIGVCLPIMAKNYRYLNPENDLYLLVKSFAAGVILATGFIHILHDAFENLTSPCISEKPWGLFPFSGFVAMVAAIGTLIMEALVTGYHKRSELIKAQPLEDEDEGVHHHHNNNGLDSPDHLRNTIVSQILELAIVAHSIIVGVSLGVSQSPNTIKPLVTALSFHQCFEGMGLGACISQAQFKYHTVVIMVLFFCLTIPTGIGVGIGISKIYNEGSPKALIVEGLLLSASAGILIYMALVDLLASDFMNPKMLRSLRLQLSAILALLVGVTCMSLLVFWEGA 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc242508g00002 350 PANTHER ZINC/IRON TRANSPORTER 54 342 - -
Stsc242508g00002 350 NCBIfam ZIP zinc/iron transport family 43 347 IPR004698 GO:0005385|GO:0016020|GO:0071577
Stsc242508g00002 350 Pfam ZIP Zinc transporter 171 344 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc242508g00002 Stsc-Chr242508 11640 20221 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc242508g00002 13 347 Inorganic Solute Cotransporters AT3G12750 49.143 2.13e-104 309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc242508g00002 K14709 - qsu:111993283 388.267