Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc242485g00004 ATGGGGAACGTTGATTTGAAGAATTTAATGTTGTTGTTTTGGTTGGTGTTGGTTGTGCCTTATTGTTTGTGTGAAGATGGTTCTGATGATTCAACTAGTGCTGTTTACATTGTTTCTCTAAGAAATGCTCCTTCTTCTCATTACTATGGAGAGTTAACAAAAATGGGTAGTAATGGCTTCCAAGTCAAAAATGGTGGTGGTGGTGGTGGTGCTTCTTCTGGGAGAACTCAGTTTCACAAACCAAGATATGGCAATGCTACAAAGACAAATAAGAGATATAGCTCTTACATTGCTCAAGTTCATGATTCTTTGTTGAAGAAAGTGTTAAAAGGAGAGAAGTATCTAAAGCTCTATAGCTACCATTATCTGATAAATGGATTTGCTGTGCTGGTTACTCAACAACAGGCAGAGAAACTAGCACAGAGTAGTGAAGTGTCCAATGTGGTCTTGGACTTTTCAGTAAGAACTGCCACTACCCATACGCCGCAGTTTTTGGGTCTGCCACGAGGAGCATGGTCTCAAGAAGGTGGGTTTGACGCTGCCGGAGAAGGCGTTGTTATCGGTTTCGTTGATACCGGCATCGATCCAATGCACCCGAGTTTTGCTGACAACAAATCTGAACATCCTTATCCTGTTCCTACTCATTTTTCTGGTGTCTGTGAGGTCACACGAGATTTTCCCTCCGGTTCTTGCAATAGGAAGCTTGTTGGAGCCCGGCATTTTGCAGCATCTGCTATAACCAGAGGAATATTTAATTCAACACAAGACTATGCTTCTCCGTTCGATGGAGATGGCCATGGAACGCATACAGCAGCTGTTGCAGCAGGGAACCACGGGATTCCGGTGATTGTTGCCGGACATCACTTTGGGAATGCTAGTGGGATGGCTCCTCGTTCACACATTGCTGTTTACAAGGCATTGTACAAGAGCTTTGGAGGATTCGCTGCAGATGTTGTGGCCGCTATAGACCAGGCAGCTCAGGATGGGGTTGACATAATTAGCTTATCAATCACTCCCAACCGACGTCCTCCAGGTGTGGCGACTTTCTTCAATCCAATAGATATGGCATTGCTGTCGGCTGTAAAGGCCGGCATTTTTGTAGTGCAAGCTGCAGGAAATACAGGACCTTCACCGACGAGTGTTTCCTCCTTCAGTCCATGGATCTTTACTGTTGGTGCTGCCTCTCATGACCGGACTTATAGCAACTCCATATTTCTTGGAAATAATGTGACCATACCTGGCGTCGGACTTGCACCTGGCACAAGTGTAAGCAAACTTTATACACTGATTCATGCACGCGATGCTTTGAACAATGATACGGCTGTCACTGATGATATGTATGTCAACGAGTGCCAAGACGCGAGCAAGTTCAGTAAGGATTTGATCCGGGGGAACCTCTTAATGTGCAGCTATTCAATCCGATTTGTGCTGGGGCTTTCCACCATCAAACAGGCCTTAGGAATGGCCAAGAACCTTAGTGCAGCTGGAGTTGTTTTCTATATGGATCCTTTTGTGATTGGCTACCAGATTAACCCAGTTCCAATGAAAATGCCTGGCATAATAATTGCATCCACAAATGATTCCAAGGTTTTGATGCAATACTACAACTCTTCACTAGAAGTTGATGCAGTTACAAAGAAAGTTACTAAATTTGGCGCAGTTGCCAGTATCCATGGTGGACTAAAAGCGAACTACAGTAATGCTGCTCCGAAGGTGATGTACTACTCTGCTAGAGGACCAGATCCGGAAGACACTCTTCCCCATGTAGCTGACATTTTGAAGCCAAACTTGTTAGCTCCTGGAAATCTTATATGGGCTGCTTGGAGTTCTCTCGGCACCGACTCAGTTGAATTTCAAGGCGAGAATTTCGCAATTATGTCTGGCACAAGCATGGCTGCACCTCATGTTGCTGGTCTTGCTGCACTGATTAGACAAAAATTCCCGAATTTCAGCCCCGCAGCCGTTGCATCTGCACTTTCCACAACTGCTTCTCAGCATGATAAGAATGGTGGGTTGATAATGGCTCAACGATCCTATGCCTATGCAGATCTAAACCTATCCCCGGCAACTCCTTTTGACATGGGAAGTGGTTTTCTGAATGCAACCGGAGCATTAAATCCCGGTTTGATTTTTGATTCCACTCCTGTGGTATTGAACTACACTGGTCAGAACTGCTGGTCCTATAACTCGACCGTATGCGGCCCTGATCTGAACTTGCCTTCAATCACCATTTCAACGCTGAACCAATCGAGAGTGGTTCAGAGGACTGTCCAAAACGTTGGTGGAAACGAGACTTACAGTGTCGGTTGGAGTGCTCCTTATGGGGTCTCAATGAGTGTATCTCCAACACACTTTTCTGTCGCCGGTGGTGAGAAGCAAGTCTTGTCTGTGCTCTTGAATGCAACCACTAACAGTTCGGTTGCAAGCTTTGGGAGGATTGGGCTCTTTGGTGATCAAGGTCATGTCCTAAACATTCCCCTTTCAGTCATTGTTAAAATCTCAAGTTACAACAACACAGTGAGCTAA 2526 0.4529 MGNVDLKNLMLLFWLVLVVPYCLCEDGSDDSTSAVYIVSLRNAPSSHYYGELTKMGSNGFQVKNGGGGGGASSGRTQFHKPRYGNATKTNKRYSSYIAQVHDSLLKKVLKGEKYLKLYSYHYLINGFAVLVTQQQAEKLAQSSEVSNVVLDFSVRTATTHTPQFLGLPRGAWSQEGGFDAAGEGVVIGFVDTGIDPMHPSFADNKSEHPYPVPTHFSGVCEVTRDFPSGSCNRKLVGARHFAASAITRGIFNSTQDYASPFDGDGHGTHTAAVAAGNHGIPVIVAGHHFGNASGMAPRSHIAVYKALYKSFGGFAADVVAAIDQAAQDGVDIISLSITPNRRPPGVATFFNPIDMALLSAVKAGIFVVQAAGNTGPSPTSVSSFSPWIFTVGAASHDRTYSNSIFLGNNVTIPGVGLAPGTSVSKLYTLIHARDALNNDTAVTDDMYVNECQDASKFSKDLIRGNLLMCSYSIRFVLGLSTIKQALGMAKNLSAAGVVFYMDPFVIGYQINPVPMKMPGIIIASTNDSKVLMQYYNSSLEVDAVTKKVTKFGAVASIHGGLKANYSNAAPKVMYYSARGPDPEDTLPHVADILKPNLLAPGNLIWAAWSSLGTDSVEFQGENFAIMSGTSMAAPHVAGLAALIRQKFPNFSPAAVASALSTTASQHDKNGGLIMAQRSYAYADLNLSPATPFDMGSGFLNATGALNPGLIFDSTPVVLNYTGQNCWSYNSTVCGPDLNLPSITISTLNQSRVVQRTVQNVGGNETYSVGWSAPYGVSMSVSPTHFSVAGGEKQVLSVLLNATTNSSVASFGRIGLFGDQGHVLNIPLSVIVKISSYNNTVS 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc242485g00004 841 ProSiteProfiles Serine proteases, subtilase domain profile. 171 705 - -
Stsc242485g00004 841 Pfam Peptidase inhibitor I9 35 157 IPR010259 -
Stsc242485g00004 841 Pfam Subtilase family 182 666 IPR000209 GO:0006508|GO:0008236
Stsc242485g00004 841 Gene3D - 716 831 - -
Stsc242485g00004 841 Gene3D - 397 565 - -
Stsc242485g00004 841 PRINTS Subtilisin serine protease family (S8) signature 627 643 IPR015500 -
Stsc242485g00004 841 PRINTS Subtilisin serine protease family (S8) signature 262 275 IPR015500 -
Stsc242485g00004 841 PRINTS Subtilisin serine protease family (S8) signature 182 201 IPR015500 -
Stsc242485g00004 841 ProSitePatterns Serine proteases, subtilase family, serine active site. 628 638 IPR023828 -
Stsc242485g00004 841 Pfam Fibronectin type-III domain 736 829 IPR041469 -
Stsc242485g00004 841 SUPERFAMILY Subtilisin-like 157 709 IPR036852 GO:0004252|GO:0006508
Stsc242485g00004 841 CDD Peptidases_S8_3 157 664 IPR034197 -
Stsc242485g00004 841 CDD PA_subtilisin_like 406 538 - -
Stsc242485g00004 841 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 110 797 IPR045051 -
Stsc242485g00004 841 Gene3D Peptidase S8/S53 domain 184 714 IPR036852 GO:0004252|GO:0006508
Stsc242485g00004 841 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 23 155 IPR037045 -
Stsc242485g00004 841 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 187 198 IPR023827 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc242485g00004 Stsc-Chr242485 15334 21734 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc242485g00004 9 835 Subtilisin-like Serine Gene Family AT4G20430 66.116 0.0 1136