Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc242474g00005 ATGGCGGGTGCAGGTGCCATGAAGAAGGTTGACAAGATTCGCCAAATCGTTCGCCTCAAACAGCTCATGATGCGTTGGAGGGCCATCAGCCACCGCCACCACCGCTACAACGACGATTCCATAGATTCCAAACCCTGTGGTTTATCTCCACGACGCGCTCCCTCGGGGTTCGTGTTCGTGTACGTGGGTCCAGAACGCAAGCGTTTCGTGATCCCCGCAAGGTTCCTTAACCTTCCGGTGTTCGCCGGTCTCCTTCAAGAAACCGAGGAGGTTTTCGGTCTTCGATGCAGCGGGGGTTTGGTCCTTCCTTGCGAAGTTGCGTTCTTCAGTAACATCGTGAAGCACCTCGAGAAGGACGAACACAAGTATGGGAAGCTTTCTTTGGAAGATTTCGTGAACATGTTTTCTGAGTTGGCTTCTGATTCTTGCTGCAAAGAAAGCATTGTTGCCTTCACTCCTCTCTTGCAGAAAGCAAGGGAGAGTGAGGGGGGTAGGACGCAGAAGACAGAGGTTGTAGTGTCGGCTAAAATATGGTTCCCACTGCTGCCAAGTACCGATTCGTTCTGCTCAGCGGATCAACCGTGTCTCTCTATCACTCACACCCTCAGCGATGTGCCGGGTGCACGTGTCACATACGCACGAACCAGCACCATCGCGTTCCTTTCACGCGCACTCTCTACGCGTTATGATTTCTTGTGCTATGTAGCGCTCTACCAGCGTCTGTTGCCTAGATCGGCGAAACGTATCACTTTCCTAGAAACTAGAACTATATTAGTTAGCACTGAGCAATTAGGAAAAAGTCGTGGTCCAAAACACAAGGTGTTACGTATCGGTTACAGGCCCATCTCACAATGGGCTCCCATGGTGAGTGACGAAGATTGGCTCGAGGTTGCGCTGCCAAAAAGGCATCCAGACTATCTGTCTCGCACAGAACATCCCGACAACCAGAATCCCAAACTAAAATTAGACCCTCCAAATACCAAAGAGCTCAGCTCGGAGAACAGATGA 1008 0.5109 MAGAGAMKKVDKIRQIVRLKQLMMRWRAISHRHHRYNDDSIDSKPCGLSPRRAPSGFVFVYVGPERKRFVIPARFLNLPVFAGLLQETEEVFGLRCSGGLVLPCEVAFFSNIVKHLEKDEHKYGKLSLEDFVNMFSELASDSCCKESIVAFTPLLQKARESEGGRTQKTEVVVSAKIWFPLLPSTDSFCSADQPCLSITHTLSDVPGARVTYARTSTIAFLSRALSTRYDFLCYVALYQRLLPRSAKRITFLETRTILVSTEQLGKSRGPKHKVLRIGYRPISQWAPMVSDEDWLEVALPKRHPDYLSRTEHPDNQNPKLKLDPPNTKELSSENR 335
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Stsc242474g00005 335 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 37 111 IPR003676 GO:0009733
Stsc242474g00005 335 Pfam Auxin responsive protein 18 115 IPR003676 GO:0009733
Stsc242474g00005 335 MobiDBLite consensus disorder prediction 305 335 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Stsc242474g00005 Stsc-Chr242474 18665 24820 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc242474g00005 9 132 Calmodulin-binding Proteins AT3G43120 33.775 3.93e-19 81.6