Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc242464g00001 | ATGGCAAGTTGTGGTAGAGAAGGAGCTGTGAGGCAGTACATAAGATCCAAGGTGCCTCGTTTGAGATGGACTCCTGAGCTTCATAGATGCTTTGTTCATGCCATTGATAGCCTTGGAGGTCATCACAAGGCTACCCCTAAGCTTGTTCTTCAGTTGATGGACGTCAAAGGCCTCACAATTTCACACGTCAAGAGCCATCTTCAGATGTACAGAAGCATGAGGGGTGACTTGGGAAGACAAGGTAGGATATCAAGCCAGCATAGGAACCAATCTTTTGAGGAGCATGATGATGGGTGTGTTGATGAAGTGAATGATGTTAATAATCTTATTTCTCATCATCATCATCATCATCATCATCATCATCAAAACTATCTTCATCCATCTTCAAAACCCGTTGGAAAAGAAGAATCCGATTCTCTCTTCGGATACAGTAACTTCCCCTCAAAAAGGGCTAGAATAGAGAGAAACTGTTCCATTTCGGAGAAGCTGCAATGCAGACAGCAGAGAACAGTGCCATATCCGTACTCCTTTTATGATTATGCTTATTCAACACACCAACAACAACCACCACCTCATTCCACAGTTTTCCCTGTGCTGCCACCACTTCTTGGAAATTTCCTTCAGGTTACTAAATTAAATGATAGAGAGACCACATCGGAGGCAATGACTGATAATAATAATAATAATAATAATAATAATAATAATGTACTTTTGAAGAACACGACCAGTGAGAAGGAGGCACGTGCAGAAGAAGAAGAGGAAGATGAAGATGTTGGAAGAGTTTGTGAATTGTCATTGTCTCTCACATTGCCAAATCCTTCACCCCAGAGAAGTAGTAATGTTTCTACTTCAGCCTCAGCCAGTGAGATCACTGAGGCTGCTATCTCTTCATCATGTTCCACTACTCTCAAAGATAGGAGGATTAATTTAGACTTGTCTCTAGCTCTTTCTGGAAATTGA | 960 | 0.4135 | MASCGREGAVRQYIRSKVPRLRWTPELHRCFVHAIDSLGGHHKATPKLVLQLMDVKGLTISHVKSHLQMYRSMRGDLGRQGRISSQHRNQSFEEHDDGCVDEVNDVNNLISHHHHHHHHHHQNYLHPSSKPVGKEESDSLFGYSNFPSKRARIERNCSISEKLQCRQQRTVPYPYSFYDYAYSTHQQQPPPHSTVFPVLPPLLGNFLQVTKLNDRETTSEAMTDNNNNNNNNNNNVLLKNTTSEKEARAEEEEEDEDVGRVCELSLSLTLPNPSPQRSSNVSTSASASEITEAAISSSCSTTLKDRRINLDLSLALSGN | 319 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc242464g00001 | 319 | Gene3D | - | 18 | 74 | - | - | |
Stsc242464g00001 | 319 | MobiDBLite | consensus disorder prediction | 268 | 289 | - | - | |
Stsc242464g00001 | 319 | SUPERFAMILY | Homeodomain-like | 17 | 72 | IPR009057 | - | |
Stsc242464g00001 | 319 | MobiDBLite | consensus disorder prediction | 216 | 237 | - | - | |
Stsc242464g00001 | 319 | NCBIfam | myb-like DNA-binding domain, SHAQKYF class | 19 | 72 | IPR006447 | GO:0003677 | |
Stsc242464g00001 | 319 | MobiDBLite | consensus disorder prediction | 112 | 139 | - | - | |
Stsc242464g00001 | 319 | Pfam | Myb-like DNA-binding domain | 21 | 71 | IPR001005 | - | |
Stsc242464g00001 | 319 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 15 | 75 | IPR017930 | - | |
Stsc242464g00001 | 319 | MobiDBLite | consensus disorder prediction | 78 | 98 | - | - | |
Stsc242464g00001 | 319 | FunFam | Myb family transcription factor | 17 | 75 | - | - | |
Stsc242464g00001 | 319 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE | 6 | 128 | IPR046955 | GO:0003700 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc242464g00001 | Stsc-Chr242464 | 5248 | 9076 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc242464g00001 | 1 | 74 | G2-like Transcription Factor Family | AT1G14600 | 73.418 | 7.71e-35 | 125 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | GARP-G2-like | Stsc242464g00001 | Myb_DNA-binding | 1.3e-05 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc242464g00001 | - | - | gmx:100787188 | 317.39 |