Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc242407g00002 ATGGTAGACACAAACGACATAATGCAGATCTCTTATCTTCGCAACAGTGAGGAGAATGGGGGTTTCATCGTGTTGGGGGAGGAGGATATAAGTACAATAGAGAGTGCATTGAAAGCTATTTGGGGACGTTCGGAAGGGTTCGAGAAAGAGTGGGATGGATTGGCTGACATTGGGCTTTTCGATGTCAAGGGTAAGGAAGTTTGCACCTATTGTGTGAAAATAGGCCATGATCATAAGTCTTGCCCAATGTTTATGGAAGACTCGAAAGAAAATAATTTTAAGGAGGATAAGAGATCTTTGACACTACAAGAAACACGGAGGATACCGGTAGAATTACCAGCGCATTTAGGGGGGACATTACCAGCGGAATTAGAATGGAATTTACCGGCGGATTTACGTCTCCGTGTTTATGGACCAAAAACCGTCGACAAGGGAGGGTTGAAGGCCCCCAACACTCACAGTTCGTTGTCGTGGTGTTGGGTATCGGTGGATTCGACCTCGCAGCCACCACCGCCGCATCCCCAGTGCCGTCCCCAGCCTCTTCCCTCTCTGTCTCTTCTCTCTCTCACGGTGTCTCTCTCTGTCTCGCACTCGAAGCTCTTTCCCATCGGCGCTGCGTTCAGCAATCGTGTCCTCCACCACCAGCCACCGTGTCGTTCAATATCTGGTCTCCACCTGCTTACTAATAATGGCAACACCAAGGATGACCTCAGACTCCCCACTGATGACGGTCTTCTTACTCAGCTTCAGAAAAGCCATCTGATCCTAAAGAATTTGAGGTGGAAAGGTTTCTTGCTATTTGCTATGCTGATCCTAATAATGTTAAGCAACCAGGAGTGCATTTTAAGTCCTTCAGGTGTGATGGAAAGTGATTATCGAGAAGTTTTGAAAGAGTTTGTGAAGAGAGGACTTAAAAAAAAAGTTGTTGCCTCTTCATGGTTATGCTCACAAGTCTTGTTTATCTCTTATATGGTGCAAACTTCAAGGACCTACCAGGTTCCTGATTATGCTATGTCATTTGTCAGAGGAACATCCAGGAAGCCATTTGGTCATTTGTGGTGGGATGAAATTGTGTCAACAATTGTGACTAGAGTTGAGCCTCATAATCAGGCTGTTCTTCACCCAAAGCAAGATCAGGTGCTTACAATTCGACAAAACGCCAGACTACAAGGATTTCCTGATTGCTATCTAGTCCTACTAAGGAAAGTGACTGTGCATGTTCGCATCACTACAAGAAATATGGACTATGGGCACCCCTAG 1260 0.4571 MVDTNDIMQISYLRNSEENGGFIVLGEEDISTIESALKAIWGRSEGFEKEWDGLADIGLFDVKGKEVCTYCVKIGHDHKSCPMFMEDSKENNFKEDKRSLTLQETRRIPVELPAHLGGTLPAELEWNLPADLRLRVYGPKTVDKGGLKAPNTHSSLSWCWVSVDSTSQPPPPHPQCRPQPLPSLSLLSLTVSLSVSHSKLFPIGAAFSNRVLHHQPPCRSISGLHLLTNNGNTKDDLRLPTDDGLLTQLQKSHLILKNLRWKGFLLFAMLILIMLSNQECILSPSGVMESDYREVLKEFVKRGLKKKVVASSWLCSQVLFISYMVQTSRTYQVPDYAMSFVRGTSRKPFGHLWWDEIVSTIVTRVEPHNQAVLHPKQDQVLTIRQNARLQGFPDCYLVLLRKVTVHVRITTRNMDYGHP 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc242407g00002 419 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 321 400 IPR029063 -
Stsc242407g00002 419 Gene3D - 220 254 IPR012340 -
Stsc242407g00002 419 Gene3D DNA Methylase, subunit A, domain 2 284 391 - -
Stsc242407g00002 419 PANTHER CYTOSINE-SPECIFIC METHYLTRANSFERASE 306 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc242407g00002 Stsc-Chr242407 8585 12706 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc242407g00002 226 286 Eukaryotic Initiation Factors Gene Family AT1G69410 44.262 8.44e-07 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc242407g00002 K00558 - gmx:100817688 124.02