Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc242406g00001 ATGTTAGCAAACCTATCTGAATTTATTAGAAAGCCACAAGAAACATTGGCCAAGGTTGCCAAACTTTATGCCCCGGGCATAATGCTTTTGAAGCTTGGCCAATCAACCACTGTAATAATATCTTGCCCAAACATTACCAAAGAAATTCTCCAAACCAATGATTTGTTGTTCTCCGATCGAACGGTTCCGAGTATTATAACTACCCTTGATCACCACACCTATAGTTTGCCCTTTTTGCCGATTTGTCCTCTTTGGAAAGATCTAAAAAAAATATGCAACGAACAATTGTTCTCCAACAAAGTCCTTGATCTAAGTCAAGGGCTTCGTCGCAAGAAGCTTCTAGACCTTCTTGACGACATGCCACTTAGTTTCACCCAAGCTTCATCCTGGTTAGACAAGTTGATTGATAAAAGGTTGGAATTAAGAGAAGAGGAAAATTATGTCACAAATAATGATATATTAGATGCACTTCTTGATGTTTCTCAAGAGGATAGCAAGAGGATGGACAGGAAAAAGATCAGACACTTCCTACTTGATCTACTTGTAGCGGGTACAGATACAACGGCATATGGATTAGAAAGAACAATGACTGAAGTACTTAACGGTCCAGAGGTTATGTTTAAGGCCAAACAAGAATTAGAAGAAAACATTGGAAGAGGTAACCCTATTGATGAGTCAGACATTGCAAAACTTCCATACTTGCAAGCAATAGTGAAAGAGAGTTTACGATTACACCCTCCAGCTCCCAAGAAAAGCCAAGGTTGA 765 0.3922 MLANLSEFIRKPQETLAKVAKLYAPGIMLLKLGQSTTVIISCPNITKEILQTNDLLFSDRTVPSIITTLDHHTYSLPFLPICPLWKDLKKICNEQLFSNKVLDLSQGLRRKKLLDLLDDMPLSFTQASSWLDKLIDKRLELREEENYVTNNDILDALLDVSQEDSKRMDRKKIRHFLLDLLVAGTDTTAYGLERTMTEVLNGPEVMFKAKQELEENIGRGNPIDESDIAKLPYLQAIVKESLRLHPPAPKKSQG 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc242406g00001 254 SUPERFAMILY Cytochrome P450 8 249 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc242406g00001 254 Gene3D Cytochrome P450 125 251 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc242406g00001 254 Pfam Cytochrome P450 124 249 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc242406g00001 254 Pfam Cytochrome P450 6 100 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc242406g00001 254 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 123 249 - -
Stsc242406g00001 254 Gene3D Cytochrome P450 1 124 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc242406g00001 Stsc-Chr242406 8556 10538 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc242406g00001 66 249 Cytochrome P450 AT2G45580 37.433 5.49e-29 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc242406g00001 - - ahf:112701636 210.305