Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc242404g00004 ATGCCGAAGCAAATTCACGAGATTAAGGACTTCCTCCTCACAGCCCGTAGGAAGGATGCACGCTCCGTGAAAATCAAGAGGAGCAGAGATGTGGTCAAGTTCAAGGTTCGTTGCTCCAAGTACCTGTACACCCTCTGTGTCTTTGACCCTGAGAAGGCTGATAAGTTGAAGCAATCACTTCCTCCAGGTTTGAGTGTGCAAGACCTTTGA 210 0.4857 MPKQIHEIKDFLLTARRKDARSVKIKRSRDVVKFKVRCSKYLYTLCVFDPEKADKLKQSLPPGLSVQDL 69
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc242404g00004 69 Gene3D - 1 69 IPR038464 -
Stsc242404g00004 69 PANTHER 60S RIBOSOMAL PROTEIN L38 1 68 IPR002675 GO:0003735|GO:0005840|GO:0006412
Stsc242404g00004 69 FunFam 60S ribosomal protein L38 1 69 - -
Stsc242404g00004 69 Pfam Ribosomal L38e protein family 2 68 IPR002675 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc242404g00004 Stsc-Chr242404 18826 20271 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc242404g00004 1 69 Cytoplasmic Ribosomal Protein Gene Family AT3G59540 94.203 1.07e-43 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc242404g00004 K02923 - pop:18106877 140.584