Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc242394g00001 ATGAGCAGGATTCTGAAAATTGGATCCGATCGGCCGGTTAAACCGGTCGAACTGCGAACCGATGACTTGTACGGCTCGATCCAACTTCAGAAACCGGAGATGATTAAATCCAAGGTTCTGAAAACCGGATCGGTCATCGAACCATTCAAGCTACCGCATCAAATGCTTGTGCAACCTAGTGGCAACCAAGTGTTTTTATTCTCCAGGGACAAGGGTTTGAAACCCAAGTCTCCCATTTTGGAGAATTTTCATCTTGGAGAGAGAACCGGCCGGGTTCTGGTTCGGTCCAACCGATCGGTTTCTGGACGGTTCACCGGTTCAATTCCGGCTTTCTCAAGAGCAGTTTCAGCATGCAGATCGATCCGCTTTCATGACCGGGCGACAGTTGAACCGGGGGCTCGAAGCCCCGATTCTGCCCTGCCTTCGGTGCTCCAACGTCGACGCTGCCTGACCACCAGTCCACCACCGTTTCGTCCCTGCGTCGCTGATCCAACGCCTCGCCGCCGTCACAGAAAGAAAGAAAGAAAAATGTCGGGGCAAACACAGCGTCTGAATGTTGTCCCCACGGTGACGATGCTGGGAGTGATGAAGGCTCGTTTGGTTGGAGCCACGCGTGGTCATGCTCTCCTAAAGAAGAAGAGCGATGCGCTTACTGTGCAGTTCAGGCAGATCCTGAAGAAGATTGTGTCTACCAAGGAATCAATGGGCCTCCCTCAAGGTCCGGTCCCGGCAGGAGAATGTTGCTGGTGTGAAACTTCCCAAGTTCGAGTACACCAATGA 780 0.5282 MSRILKIGSDRPVKPVELRTDDLYGSIQLQKPEMIKSKVLKTGSVIEPFKLPHQMLVQPSGNQVFLFSRDKGLKPKSPILENFHLGERTGRVLVRSNRSVSGRFTGSIPAFSRAVSACRSIRFHDRATVEPGARSPDSALPSVLQRRRCLTTSPPPFRPCVADPTPRRRHRKKERKMSGQTQRLNVVPTVTMLGVMKARLVGATRGHALLKKKSDALTVQFRQILKKIVSTKESMGLPQGPVPAGECCWCETSQVRVHQ 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc242394g00001 259 Pfam ATP synthase subunit D 193 236 IPR002699 GO:0046961
Stsc242394g00001 259 MobiDBLite consensus disorder prediction 129 181 - -
Stsc242394g00001 259 Gene3D - 176 237 - -
Stsc242394g00001 259 PANTHER V-TYPE ATP SYNTHASE SUBUNIT D 177 236 IPR002699 GO:0046961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc242394g00001 Stsc-Chr242394 5998 8036 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc242394g00001 177 236 Primary Pumps ATPases(2) AT3G58730 88.333 8.45e-30 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc242394g00001 K02149 - csin:114318744 120.553