Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc242345g00002 ATGGAGAAGAACCTTGCTGGAAACTACGGCAGTTTCTTCGCTCGTAGTATCGCTCGCAGGGATGACCGCTACAACCACGAAGACGCCGGCGACGAACCGCCACATTCTCCCATGGAGGAATCAACAGAATCCGATGCCAAACTAGACACCATATCAGAAAGCGAGTCACAGCCACCGCCGGACGAGGGAGGAGAGGATAATGCAGAAGAGGGCTCAGAGAATAAGGAAGAGGCCGCAGTAGAGGATGTTATTGATGATCCTCTGTTAAGTCTCGAGAAGGCGCACGAAGACATGGATCAATTCCTCGCCACAATGAAAGAGAAGGAGGAAGCATCGGTTGAGATACCTGTTTTCCTTGAAAAGTTCTTGGATCTGGTGGAGGACAAGATAGCAAGGTATGACGCGGGCGACGAAAGAGCGAAGGATGATTCGTCGTTGTTGGAAGCGATGAGCCGGATTTCGAGCCTGATGAAAAATTTAGAGACTCAGAACCAACCGGAACCGCTCATTAACCGCATTGGTTCGATCCACCAACGTGCAATGGCGTACTTGGAGGAAGATTTCCGGTTGTTGATGGAACAATATAGAAACGCTACGGAATCAGATCCCGGCGGCCATGACCACAAGGGGAAGCACGTGGAGGAACAGCCGCAGGAGGATTCCGAGAACCCGCCGGAGGAATCCGAGCCGGATTTTCCGGGTTATTCGGAGGAAACTATTGGCAGCCTGAAAGAAATTGCGGGCGAGATGTTTGCCGGCGGCTACCAATCGGAGTGCTGCCAGGTTTACATTACCGCAAGGAGGAACGCGTTCGATGATGCTATGCAGAAATTAGGGTTCGAGAAGTTCAGCATCGACGAGGTCCAGAAGGCGCATTGGGAGACTCTTTCGAGGGAGATGATCCCGTCGTGGATCAACACGTTCAAGCAGTGCGCCACCGTGTACTTCCCCGGCGAGCGGAGGTTGGTGGATGAGGTGTTCGCTAATCAGCCTGAGTTAGCAGCGGGGATGTTTAGCAACCTCTGTCGCGGCGCGGTGATCCAGCTGCTGAACTTCTCGGAAGGCACAGCTATGACAAAACGCGCGGCGGAGAAGCTCTTCAAGCTCCTCGACATGTACGAGACCGTTCGGGATGTGATCCCGAAAATGGACGAGCTCTTCTCGGAAGACCACGTCGCGGAGGAGCTGAAGACGGAGTTAAACCTCGCCAAGTCAAGGCTTGGCGAGGCAACTATCTCCATCTTCGGCGACTTCGAGAACAACATAAAATCTGACACGGGAAAAACGCCGGTGCCAGGTGGCGCCGTGCACCCTGTGACGCGCTATGTGATGAACTACCTTAATACGAGTGGTGATTACAAGGAAACATTGGAGCAGGTGTTCAAGGAGCATTCGAAAATTGAGCGCGCAGATTCCACTAGTAGGCCTCCCATTGCCGGTAGGGAGAATCGGGGGCAAAACGGGAAAGAAGATGAGAAGGAAGCTTCGTCGCCGTTTACAGCGCAAGTGATGAGGGTGATGGACTTGCTTGACTCCTACCTCGACTCCAAGGCCAAGCTCTACAAGGACCCGTCTCTTACTGCATTTTTCTTGATGAACAATGGAAGGTACATTCTACAAAAGATAAAGGGCTCATCAGAAATGGTACAAGTGATGGGAGACAATTGGTGTCGAAAGAGATCCTCAGATCTTCGATTATTCCACAAGGATTATTTGAGAGATACATGGAACAACAGAGTGTTGAAAACCGCCCTTAATCACGAAGGGCTGACCCAAAACGGCAAGGTTCATAAGCCTACTCTAAAGGAACGGTTCAAGACATTCAATGCCATGTTTGACGAGATCCACAAGACACAGAGCTCGTGGGTTGTGAAAGATGAGCAGCTCCAATCAGAGCTTAGGATCTCCATATGCGCTGTGGTCGTCCCTGCTTACAGGGCATTTCTTGCAAAATACTCTCCGGTTTTGGATCCTGGCCGACAAACAGAGAAGTACATCAAGTACCAACCTGAAGATTTAGAGACTTATATTGATGAGTTATTTGATGGAAAACCTCATCAGTCTATTGCCAAGAGGAAAACATGA 2085 0.5065 MEKNLAGNYGSFFARSIARRDDRYNHEDAGDEPPHSPMEESTESDAKLDTISESESQPPPDEGGEDNAEEGSENKEEAAVEDVIDDPLLSLEKAHEDMDQFLATMKEKEEASVEIPVFLEKFLDLVEDKIARYDAGDERAKDDSSLLEAMSRISSLMKNLETQNQPEPLINRIGSIHQRAMAYLEEDFRLLMEQYRNATESDPGGHDHKGKHVEEQPQEDSENPPEESEPDFPGYSEETIGSLKEIAGEMFAGGYQSECCQVYITARRNAFDDAMQKLGFEKFSIDEVQKAHWETLSREMIPSWINTFKQCATVYFPGERRLVDEVFANQPELAAGMFSNLCRGAVIQLLNFSEGTAMTKRAAEKLFKLLDMYETVRDVIPKMDELFSEDHVAEELKTELNLAKSRLGEATISIFGDFENNIKSDTGKTPVPGGAVHPVTRYVMNYLNTSGDYKETLEQVFKEHSKIERADSTSRPPIAGRENRGQNGKEDEKEASSPFTAQVMRVMDLLDSYLDSKAKLYKDPSLTAFFLMNNGRYILQKIKGSSEMVQVMGDNWCRKRSSDLRLFHKDYLRDTWNNRVLKTALNHEGLTQNGKVHKPTLKERFKTFNAMFDEIHKTQSSWVVKDEQLQSELRISICAVVVPAYRAFLAKYSPVLDPGRQTEKYIKYQPEDLETYIDELFDGKPHQSIAKRKT 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc242345g00002 694 Pfam Exo70 exocyst complex subunit 303 679 IPR046364 GO:0000145|GO:0005546|GO:0006887
Stsc242345g00002 694 Coils Coil 91 111 - -
Stsc242345g00002 694 MobiDBLite consensus disorder prediction 200 219 - -
Stsc242345g00002 694 SUPERFAMILY Cullin repeat-like 141 682 IPR016159 -
Stsc242345g00002 694 Coils Coil 393 413 - -
Stsc242345g00002 694 MobiDBLite consensus disorder prediction 16 50 - -
Stsc242345g00002 694 MobiDBLite consensus disorder prediction 1 82 - -
Stsc242345g00002 694 Gene3D Exocyst complex component Exo70 121 691 - -
Stsc242345g00002 694 MobiDBLite consensus disorder prediction 465 498 - -
Stsc242345g00002 694 PANTHER EXOCYST COMPLEX PROTEIN EXO70 106 683 IPR004140 GO:0000145|GO:0006887
Stsc242345g00002 694 MobiDBLite consensus disorder prediction 198 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc242345g00002 Stsc-Chr242345 1324 4350 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc242345g00002 21 694 EXO70 exocyst subunit family AT5G13990 45.492 0.0 587
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc242345g00002 K07195 - gmx:100820172 781.556