Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc242340g00002 ATGGAACACGTTTTTGGAATAGCCGATGCAACAGAGGAAATGATACAAGTTTTTGAATCATTTATGGATTCCAGGGTTTTTAGAGAATGTTTTCAACCCGTCGACATTGATGTTACATATTTGATTATTCACGAAATCCGGTTCGGCTTGAGAAAGAAATCTGTTTCGATGGATGCATTTGTTAAATCCGGTTCACCTGATAGACGAAATCCGCTTCGATTGTTAATGAGTACGTGTTATTTGCAGCAGTCGTGTGATGTTGATGAGGAATATGTCCTCAAGGTTGGAATGACTTTTGAATCAGTTGATGAAGCTGGTTTATTCTATAAAAAGTATGCAAAACGTGCAGGCTTCTCTACAAAAATAAGGAACACAAATAGGTGTAAAGAGACCAAGGAAGCAAAGAATCAACTCATCACATGCAATAGAGAAGGGAGATGGACATCTGAAGTACCTTCTGTGTAG 465 0.3828 MEHVFGIADATEEMIQVFESFMDSRVFRECFQPVDIDVTYLIIHEIRFGLRKKSVSMDAFVKSGSPDRRNPLRLLMSTCYLQQSCDVDEEYVLKVGMTFESVDEAGLFYKKYAKRAGFSTKIRNTNRCKETKEAKNQLITCNREGRWTSEVPSV 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc242340g00002 154 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 89 145 - -
Stsc242340g00002 154 Pfam FAR1 DNA-binding domain 108 146 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc242340g00002 Stsc-Chr242340 8623 9306 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc242340g00002 FAR1 4.4e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc242340g00002 - - aip:107636690 88.5817