Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc242326g00004 ATGTCTTCCAACAAGAAACAAGCTCTTTTCAAAACTGTATTCACAGTAAACGGTAGCTGTGGCTGTGGCAAAACAAAGGCCTTAGAGGTACACGATCCAACCCCAAAACCCAAAATCTCCATTCACCACAACAATACCAATACAAATACAAGCAGCAGCATGGCTTCTTCATTCAGCACTACTACTTCTCACAACGTTGCCGAGGACGAAGATACCTCCACCACAATCTCCGATGATCATAGCAGCAATAACCTTATTATCTCCAAACGAAGCCCTCTCATGGATACACTTGCAGTTGAGAAGGACTCTTCGGACCCATATCATGATTTCCGCCATTCAATGCTCCAAATGATCTTTGAGAAGGAGATTGAATCTAAGGATGATCTTCAGGATCTTCTTCAGTGTTTTCTTCGCTTGAATGCATCTCATTACCATCATATCATCGTTAAGGCCTTCAGTCAGATATGTGAAGAGGCCTTCCCTGACAAGGTTTCTACTACCCCTTCTATAATAAACACAACATCTTCCTCTTGTAGGAACACCTTCATCATTCACAAGACTTGCCTCTGA 570 0.4246 MSSNKKQALFKTVFTVNGSCGCGKTKALEVHDPTPKPKISIHHNNTNTNTSSSMASSFSTTTSHNVAEDEDTSTTISDDHSSNNLIISKRSPLMDTLAVEKDSSDPYHDFRHSMLQMIFEKEIESKDDLQDLLQCFLRLNASHYHHIIVKAFSQICEEAFPDKVSTTPSIINTTSSSCRNTFIIHKTCL 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc242326g00004 189 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Stsc242326g00004 189 MobiDBLite consensus disorder prediction 39 70 - -
Stsc242326g00004 189 MobiDBLite consensus disorder prediction 33 81 - -
Stsc242326g00004 189 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 44 159 IPR038933 GO:0045892
Stsc242326g00004 189 ProSiteProfiles OVATE domain profile. 99 158 IPR006458 -
Stsc242326g00004 189 Pfam Transcriptional repressor, ovate 103 158 IPR006458 -
Stsc242326g00004 189 NCBIfam uncharacterized plant-specific domain TIGR01568 98 156 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc242326g00004 Stsc-Chr242326 14600 15242 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Stsc242326g00004 Ovate 1.4e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc242326g00004 - - adu:107476507 275.789