Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc242316g00003 ATGGTCTCCAAAACCGGTGACTCTGCTTCTAAGCTTCGAAAACAACATGGGGAGTCAGCAAATGATGGTGCTGGTGGATCCTTGTTGATGAAGATAAATCAGTTGAGAAAGCAAATACAGGCGGAGAGAACTGTATTTGTCAAAGAAAAACTTAAGAGGAATGAGAAGATGCTAAAAACTCATACTTCAGTCATCATGTCAGCAATATCAAGTAGAGAATCTTCACAGGGAGATGAAACAAGTGCAAGTCCAATGCTTTCTTCAAGAATTGACCATCCTTTGTGTAAATTCAGTGCTTTCTCTCATGGTTCAGGAGATAAAGACCACAGCAATCAAGACATATTACCTGCTACAACTATTAAGATTCCATATGTTGAAGGATTACCACCATATACATCTTGGATATTTTTGGGCAGAAATCAGAAAATGGCTGAAGATCAATCAGTTGTTGGAAGAAGGCGTATCTACTATGACCAGCACGGAAGTGAAGCACTGATATGTAGTGACAGTGAGGAAGAATTAACTGAACCAGAGGAAGAAAAACATGAATTTTCTGAGGCCGAAGACCGAGTTCTATGGATGGCATTGGAGGAACATGGCATAAATGAGGAGGTATTGGATATTGTGAGCCAGTTTGTTGGGGGCACCAGTTTAGAAATTCAGGAACGGTACAAAATCATGAAGGAAGATAATATACAAAGCTTTGTCCTGCATTCAGAAGATACGGGAGAACCTGAATCTTCTGTTGGCATTCATCGAGAGAAAAGCCTGAATGCTGCATTAGATTCTTTTGATAACCTCTTCTGCCGTCGATGCCTGGTTTTTGACTGTCAATTGCATGGTTGTTCTCAGCCTTTAATATACCCGTGTGAGAAGCTGACAGTTTGGTCTGGGCCTGAAGGCAATAGGATTCCATGCAGTGATCAGTGTTACCTTCAGTTGAAGGTTATAAAAAGTTTGTCAGAGAATTCAACGATCAGATCTTTTCAGGACAAGAAATCCACAATTATGGAAGAAGGAAATAGTATATTGGCCTCCTCCAGTTCCAAGGAACCTGGTGATCAGATTACTACATCTTTCTCGACTGAAGTTGATTGTCATGAAGATCTGAATATAAATGCTCCTGTCTCGGAAAGTGTGGGTAAACGGAAGATCACTAATCATTTAGACAGAGCAGCATGTGTGTCAACATTGCGTCCTGATGATTCTCAAAATCCATCAAAAAAGCAGAAACGAATAGCCAATCATGAGGATCCTTCAATTACTGATCATAGCAAGAGCCACAGCTTGGATGCATGTGATGAAGGTAAATGCAGCAGTGAAAATTTGGAAAAATCTATTGAACATGCTTCAAATAAATCAGTAGCTTTTTCTAGCACTTGCCATGGTGAGCAAGACAAAAGTGTCCGGGATGAGTCAAAAGATGCCACAATTGACACAGAGTTCAAGTCTTCCAATCCAATGGAAGGCCAAGTTGATGGGATTCGTAGTTTCTCAGACTGGAAACCTCTTGAGAAAGAACTATACTTGAAGGGAGTAGAAATGTTTGGCAGAAACAGTTGCCTCATAGCAAGAAATTTACTTTCTGGCTTGAAGACTTGCATGGAAATAGCTAGTTACATGCAAGCTGGTGCAGTGTCAATGCCCCATATATCAAGTGTTGCCTCAAGTTCGACCACTGACTGCAAGGGAAAAACTGATGCAGAGTGCATGGACCGAGATATTGCATCAAGGTCCCGGTTGCTGAGGAAAAGGGGCAAAACAAGGAAGTTCAAATACTCCTGGAAGTCTGCTGGCCACCCATCAATATGGAAAAGAATTGCTGATGGGAAAAATCAATCGTGCAAGCAATATACACCATGTGGATGTCAGTCAATGTGTGGAAAGCAATGCCCTTGTGTTAATGTTGGAAATTGCTGTGAAAAATACTGCGGTTGTTCAAAGAGCTGCAAAAATCGGTTTAGAGGATGCCATTGTGCCAAGAGTCAGTGCAGAAGTCGCCAATGCCCATGCTTTGCTGCTGGACGTGAATGTGACCCAGATGTCTGTAGAAATTGCTGGGTTAGTTGTGGGGATGGTTCATTAGGGGAGCCCCCTCGTCGTGGAGATGGTCAATGTGGAAATATGAGGCTTCTTTTGAGGCAGCAACAGAGGATTCTCTTGGCAAAGTCTGATATTGCAGGATGGGGAGCGTTCTTGAAGAACCCAGTTAACAAAAATGATTACCTAGGAGAATACACAGGGGAACTGATCTCCCACCGAGAAGCAGATAAGCGTGGGAAAATATATGATCGTGCAAACTCGTCTTTCCTGTTTGACTTGAATGATCAGTATGTTCTTGATGCTTATCGCAAAGGAGATAAGTTGAAATTTGCAAACCACTCATCAAATCCCAACTGCTATGCTAAGGTGATGTTGGTTGCTGGAGACCACCGAGTAGGCATATTTGCCAAGGAGCATATTGATGCTAGTGAGGAGTTGTTCTATGATTATCGCTACGGTCCAGATCAAGCACCGCCATGGGCACGTAAACCTGAGGCATCCAAGAGAGACGAATCAGCAGTTACTCAAGGCAGAGCAAAGAAACACCAGTCCCATTGA 2601 0.4245 MVSKTGDSASKLRKQHGESANDGAGGSLLMKINQLRKQIQAERTVFVKEKLKRNEKMLKTHTSVIMSAISSRESSQGDETSASPMLSSRIDHPLCKFSAFSHGSGDKDHSNQDILPATTIKIPYVEGLPPYTSWIFLGRNQKMAEDQSVVGRRRIYYDQHGSEALICSDSEEELTEPEEEKHEFSEAEDRVLWMALEEHGINEEVLDIVSQFVGGTSLEIQERYKIMKEDNIQSFVLHSEDTGEPESSVGIHREKSLNAALDSFDNLFCRRCLVFDCQLHGCSQPLIYPCEKLTVWSGPEGNRIPCSDQCYLQLKVIKSLSENSTIRSFQDKKSTIMEEGNSILASSSSKEPGDQITTSFSTEVDCHEDLNINAPVSESVGKRKITNHLDRAACVSTLRPDDSQNPSKKQKRIANHEDPSITDHSKSHSLDACDEGKCSSENLEKSIEHASNKSVAFSSTCHGEQDKSVRDESKDATIDTEFKSSNPMEGQVDGIRSFSDWKPLEKELYLKGVEMFGRNSCLIARNLLSGLKTCMEIASYMQAGAVSMPHISSVASSSTTDCKGKTDAECMDRDIASRSRLLRKRGKTRKFKYSWKSAGHPSIWKRIADGKNQSCKQYTPCGCQSMCGKQCPCVNVGNCCEKYCGCSKSCKNRFRGCHCAKSQCRSRQCPCFAAGRECDPDVCRNCWVSCGDGSLGEPPRRGDGQCGNMRLLLRQQQRILLAKSDIAGWGAFLKNPVNKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLNDQYVLDAYRKGDKLKFANHSSNPNCYAKVMLVAGDHRVGIFAKEHIDASEELFYDYRYGPDQAPPWARKPEASKRDESAVTQGRAKKHQSH 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc242316g00003 866 FunFam Putative histone-lysine N-methyltransferase EZH2 618 834 - -
Stsc242316g00003 866 ProSiteProfiles SET domain profile. 717 832 IPR001214 GO:0005515
Stsc242316g00003 866 SMART CXC_2 652 689 IPR033467 -
Stsc242316g00003 866 SMART set_7 717 838 IPR001214 GO:0005515
Stsc242316g00003 866 Gene3D SET domain 618 834 IPR046341 -
Stsc242316g00003 866 Pfam CXC domain 656 687 IPR041355 -
Stsc242316g00003 866 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 3 866 IPR025778 GO:0031519
Stsc242316g00003 866 MobiDBLite consensus disorder prediction 843 859 - -
Stsc242316g00003 866 MobiDBLite consensus disorder prediction 1 26 - -
Stsc242316g00003 866 Pfam SET domain 728 831 IPR001214 GO:0005515
Stsc242316g00003 866 SUPERFAMILY SET domain 618 835 IPR046341 -
Stsc242316g00003 866 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 27 865 IPR045318 GO:0006338|GO:0042054
Stsc242316g00003 866 MobiDBLite consensus disorder prediction 449 475 - -
Stsc242316g00003 866 MobiDBLite consensus disorder prediction 449 463 - -
Stsc242316g00003 866 ProSiteProfiles CXC domain profile. 604 703 IPR026489 -
Stsc242316g00003 866 MobiDBLite consensus disorder prediction 395 434 - -
Stsc242316g00003 866 MobiDBLite consensus disorder prediction 837 866 - -
Stsc242316g00003 866 CDD SET_EZH 717 833 - -
Stsc242316g00003 866 MobiDBLite consensus disorder prediction 404 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc242316g00003 Stsc-Chr242316 17662 27102 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc242316g00003 706 835 C2H2 Transcription Factor Family AT2G23740 26.531 4.89e-09 58.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Stsc242316g00003 SET 1e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc242316g00003 - K11430 gmx:100808730 1329.31